Gene Information

Name : ribD (Acin_0358)
Accession : YP_004895742.1
Strain : Acidaminococcus intestini RyC-MR95
Genome accession: NC_016077
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein ribD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 376404 - 377504 bp
Length : 1101 bp
Strand : +
Note : COG1985

DNA sequence :
TTGACTGATGAGGAATATATGCAGATGGCCCTGGATCTTGCTGAAAAGGCCCGCGGGGCGACAAGTCCCAATCCGCTCGT
CGGATGTGTCATCGTAAGTCCTGATGGACACGTGGTGGGAAAAGGGTATCATCACAAGGCCGGTGAGCCCCATGCCGAAA
TCAATGCCATGGACGACGCAGGCGAGAAGACTGCAGGCGCTACGGCTTATGTGACTTTGGAGCCCTGTTCCCACTATGGC
AGGACGGGTCCCTGTTGTGAGGCCTTGATCAAGGCCGGTATCAAAAAAGTTGTTGCCGCGGCCACAGACCCCAATCCCCG
TGTATCGGGGCGCGGCTTTCGCCGCCTTGAAGAAGCAGGTGTTGAGGTCGTAAGCGGTGTCCTTGCAGACAAAGCCTACA
GGCAAAACGAGATCTTCATGCATTATATGAAGACGGGCCGTCCGTTTGTGGCTCTAAAGTACGCCATGACCCTTGATGGC
AAGATTGCTACGGTTTCTGGCGATTCCAAGTGGATTACCGGGGTCAAGGCAAGAACGTATGCGCATCGCCTGCGCAGCTG
GTATGACGCCATCCTGGTGGGCCGAGAAACCGTGGCCCAGGATGATCCATCCCTTACCGTACGTCTCGTGGAAGGAAAAA
ATCCCCTGCGTATCATCCTTGACAGCAAGGCGTCCCTTCCCTTGGAACGTAAGGTCTTTACGGATGGGGCGGCAGACACG
CTTCTTGTCGTCACGCCGCAGGCCCTTCAGGAAAAGGTCAGGGCCTTTGCTGACCTGCCGGGTGTTTCGGTCCTCACGGC
TGCGGAAAGGGACGGGCATGTGGATCTTTCTGACCTCCTGCAGCAACTTGCCAAAAAAGATGTGACCAGCGTCCTTGTCG
AAGGAGGCAGCGATATCCATGGAGCTTTCTTTGATGCAGGCTTGGTTGAACGGGTCTATGCTTTCATTGCACCGAGCCTC
ATTGGCGGGAATAAAAGCCGTCCTGCCATTGGCGGTCAAGGCGCGAGCACGATGGAGCAGAAAGTGACGCTTCAGGAAGT
GACCACTTTGCCCCTTGAACCTGATCTTTTGGTTACGGGCCTTACCCGTAAGGGGGTGTGA

Protein sequence :
MTDEEYMQMALDLAEKARGATSPNPLVGCVIVSPDGHVVGKGYHHKAGEPHAEINAMDDAGEKTAGATAYVTLEPCSHYG
RTGPCCEALIKAGIKKVVAAATDPNPRVSGRGFRRLEEAGVEVVSGVLADKAYRQNEIFMHYMKTGRPFVALKYAMTLDG
KIATVSGDSKWITGVKARTYAHRLRSWYDAILVGRETVAQDDPSLTVRLVEGKNPLRIILDSKASLPLERKVFTDGAADT
LLVVTPQALQEKVRAFADLPGVSVLTAAERDGHVDLSDLLQQLAKKDVTSVLVEGGSDIHGAFFDAGLVERVYAFIAPSL
IGGNKSRPAIGGQGASTMEQKVTLQEVTTLPLEPDLLVTGLTRKGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-49 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-49 41