Gene Information

Name : phoB (Acin_2041)
Accession : YP_004897386.1
Strain : Acidaminococcus intestini RyC-MR95
Genome accession: NC_016077
Putative virulence/resistance : Resistance
Product : two-component system transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2044018 - 2044686 bp
Length : 669 bp
Strand : -
Note : COG0745

DNA sequence : 
GTGGAAGATGATGAGAACATCCGTGAACTTGTGGCCTATGCCCTGGAAAGCCAGCAGTTTGAGACACAGACATTTGCTGA
CGGGGAATCTTTTTATAAAGTCCTCGAAAAAAAGATCCCTGATTTGGTGTTGCTTGATATCATGCTGCCGGGCGAAAGTG
GAATCGAAATCCTTAAAAAGATCCGGCATAAGGAGAGGACGGCAGACCTTCCGGTCATCATGCTGACGGCACGAACCAGT
GAATATGATGTTGTCAAAGGACTCACCATTGGGGCTGATGATTATGTCACCAAACCTTTTGGCATCTTGGAATTGATTTC
AAGGATCAGGGCCGTTTTACGCCGTTCCCACCGAGTGGAGAAACCTTCTGAGATGCTGGTGTGCGGGCCTGTCACCTTGG
ACCCCCTAAAGCATGCCGTCTCAGCTTATGGGGAAGAGGTAATGCTGACGGCCAAGGAATTTGAACTGCTCCACTATCTT
ATGATGAACGTGGGCATCGTGCTCCAACGGGAACAGATCATGGAATCTGTATGGGGCTTTACCTACGCCGGTGAAAGCCG
TACCATAGACATGCATATCAAGAGCCTGCGTCAGAAGCTCGGTGAGGGAGGACAGATTATCAAGACAATCCGCGGCGTGG
GATACCGGCTTGATGAGCCAGAATCATGA

Protein sequence : 
MEDDENIRELVAYALESQQFETQTFADGESFYKVLEKKIPDLVLLDIMLPGESGIEILKKIRHKERTADLPVIMLTARTS
EYDVVKGLTIGADDYVTKPFGILELISRIRAVLRRSHRVEKPSEMLVCGPVTLDPLKHAVSAYGEEVMLTAKEFELLHYL
MMNVGIVLQREQIMESVWGFTYAGESRTIDMHIKSLRQKLGEGGQIIKTIRGVGYRLDEPES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-32 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_004897386.1 two-component system transcriptional regulator CP001918.1.gene5135. Protein 2e-27 45
phoB YP_004897386.1 two-component system transcriptional regulator CP001138.1.gene4273. Protein 7e-27 45
phoB YP_004897386.1 two-component system transcriptional regulator CP000034.1.gene3834. Protein 1e-26 44
phoB YP_004897386.1 two-component system transcriptional regulator CP000647.1.gene4257. Protein 7e-27 44
phoB YP_004897386.1 two-component system transcriptional regulator NC_002695.1.915041.p Protein 1e-26 44
phoB YP_004897386.1 two-component system transcriptional regulator BAC0533 Protein 7e-27 44
phoB YP_004897386.1 two-component system transcriptional regulator CP004022.1.gene3215. Protein 3e-30 43
phoB YP_004897386.1 two-component system transcriptional regulator AF310956.2.orf0.gene Protein 8e-33 41
phoB YP_004897386.1 two-component system transcriptional regulator AE016830.1.gene2255. Protein 6e-31 41
phoB YP_004897386.1 two-component system transcriptional regulator U35369.1.gene1.p01 Protein 6e-31 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_002952.2859905.p0 Protein 1e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_002951.3237708.p0 Protein 2e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_003923.1003749.p0 Protein 1e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_002758.1121668.p0 Protein 2e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_007622.3794472.p0 Protein 1e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_009641.5332272.p0 Protein 2e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_013450.8614421.p0 Protein 2e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_007793.3914279.p0 Protein 2e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_002745.1124361.p0 Protein 2e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator NC_009782.5559369.p0 Protein 2e-39 41
phoB YP_004897386.1 two-component system transcriptional regulator BAC0197 Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_004897386.1 two-component system transcriptional regulator VFG0473 Protein 2e-26 42