Gene Information

Name : Acin_1945 (Acin_1945)
Accession : YP_004897293.1
Strain : Acidaminococcus intestini RyC-MR95
Genome accession: NC_016077
Putative virulence/resistance : Unknown
Product : site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1956301 - 1957818 bp
Length : 1518 bp
Strand : -
Note : COG1961

DNA sequence :
ATGAACAGTCAAAAAAAGAGAAGGGTGGCAGGCTATGCACGGGTTTCAACGGATCACGATGAGCAACTTACTAGCTATGA
AGCACAGGTGGATTATTATACGCGTTATATCCAGAGCAGAAATGATTGGGAATTTGTCGGGATATACACGGATGAAGGCA
TTTCAGCTACGAATACCAAACACCGGGAAGGATTTAAGCGAATGATAGCGGATGCTATAGCCGGCAAAATTGACCTTATC
ATCACAAAATCTGTCAGCCGGTTTGCCAGGAATACGGTGGACAGCTTGACCACCGTGCGAAAACTGAAAGATAAAGGGAT
TGAAATCTATTTTGAAAAGGAAAATATCTGGACACTGGACGCAAAAGGGGAACTCCTCATTACGATTATGAGTTCTCTGG
CACAGGAAGAGAGCCGCAGCATCTCTGAGAATGTGACTTGGGGACACCGGAAACGGTTTGCTGATGGGAAGGTCAGTCTG
GCATTCACTCATTTTCTTGGGTATGATAAGGGAATGGATGGCAACCTGGTAGTGAATAAAAAGCAGGCAGAAATCGTAAA
GTTGATTTACCGTTTGTATCTTAACGGATACACGTTTCATTCTATTGCAAAAGAACTGACGGAACGCAAGATTCCCACTC
CAGCTGGTTGCAAAATCTGGAGAGCTAACACGATCCGAAGTATTCTCATGAATGAAAAGTATAAAGGGGATGCCCTGCTT
CAGAAAAAAATCACGGTTGATTTTCTGACAAAAGAGACAAAGAAAAATGAAGGGGAAGTGCCACAGTATTATGTGGAACA
TAACCATGAAGCTATCATCAGCCCGCAGGTATTCGATTGGGTACAGGAGGAAATCAAGAGGCGGCGTAAAAGGAAAAAAC
GTTACAGCGGCGTATCCATCTTCTCCAGTAAAATCAAATGCGGCCAGTGCGGCGGCTGGTACGGGGCCAAGGTCTGGCAT
TCGACTGATAAGTACCGGAGAACCATCTACCGCTGCAATGACAAATTCAAGAATCACTGTCAGACGCCGCACCTGACGGA
GAATGAAATTAAAGGTGCTTTTATCCGAGCAGTCAATCAGCTTATTGAAAATAAGGAAGATATTCTGAGCAATATCACGA
TGCTGAAAAAGCGTCTTACAGATACCGCATCTTTGGAAAAGGAACGTGATGCGCTGGAATTAGACCTGAACATGTTGACC
GACCAGGTGCAACAGCTCATTGCTGAGAATGCCCAGGTGGCACAGGACCAGGATGAATATGGCAGGAAGTACAACGGGCT
GGTCAGCCGGTATGAAGAAACGAAGAAGAAGTATGATCAGGTCTGTGATGCCATACAGCAGTGTGTGGACAGATACTGGA
AGCTGGATAACTTTATGAAAAATCTGCAGAAACAAAATCTTGTATATGAGTTTGACGAAAGGCTGTGGTGCAGTTTGGTA
GACTTCATTATAGTATACAGTAAAGTAAAAATTCAAATAGTTTTTAAGAATGGTACGAAAATACATGTGGGAATGTGA

Protein sequence :
MNSQKKRRVAGYARVSTDHDEQLTSYEAQVDYYTRYIQSRNDWEFVGIYTDEGISATNTKHREGFKRMIADAIAGKIDLI
ITKSVSRFARNTVDSLTTVRKLKDKGIEIYFEKENIWTLDAKGELLITIMSSLAQEESRSISENVTWGHRKRFADGKVSL
AFTHFLGYDKGMDGNLVVNKKQAEIVKLIYRLYLNGYTFHSIAKELTERKIPTPAGCKIWRANTIRSILMNEKYKGDALL
QKKITVDFLTKETKKNEGEVPQYYVEHNHEAIISPQVFDWVQEEIKRRRKRKKRYSGVSIFSSKIKCGQCGGWYGAKVWH
STDKYRRTIYRCNDKFKNHCQTPHLTENEIKGAFIRAVNQLIENKEDILSNITMLKKRLTDTASLEKERDALELDLNMLT
DQVQQLIAENAQVAQDQDEYGRKYNGLVSRYEETKKKYDQVCDAIQQCVDRYWKLDNFMKNLQKQNLVYEFDERLWCSLV
DFIIVYSKVKIQIVFKNGTKIHVGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 1e-77 41
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 1e-77 41
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 4e-83 41