Gene Information

Name : Acin_1875 (Acin_1875)
Accession : YP_004897224.1
Strain : Acidaminococcus intestini RyC-MR95
Genome accession: NC_016077
Putative virulence/resistance : Unknown
Product : Site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1899458 - 1901035 bp
Length : 1578 bp
Strand : -
Note : COG1961

DNA sequence :
ATGGCAAAAACAGTAAGAGCGATTCCGGCAACAATCAGCCGTTATACATCATCTCCGATTAATAGTCGGAAGAAAAGAAA
AGTAGCAGGTTACGCACGGGTTTCAACAGACCACGATGATCAGATTACCAGCTATGAAGCCCAAGTGGATTATTATACAA
ACTATATCAAAGGGCGGGATGACTGGGAATTTGTAGGTATCTATACGGATGAAGGAATCTCTGGTACAAATACCCGCCAT
CGTGATGGATTCAAGCGAATGGTCAATGATGCTCTGGAAGGAAAAATCGACCTGATCATCACAAAGTCTGTCAGCCGCTT
TGCTAGAAATACCGTCGATAGCCTTTCCACTATTCGGAAATTAAAAGAACACAAAATAGAGTGCTACTTTGAAAAGGAAA
ATATCTGGACTTTCGACAGCAAGGGAGAATTGCTCCTGACGATCATGAGTTCCCTGGCCCAGGAAGAAAGCCGGAGTATT
TCAGAAAATGTCACCTGGGGTCATCGGAAGCGGTTTGCCGATGGCAAAGTCAGCGTCGCTTACAGCCGTTTCCTGGGATA
CAAGAAAGGCCCGAACGGTGGGCTAGTAGTTGTACCAGAAGAAGCAACAACGATCAAGCTCATCTACAAGCTATTCCTAG
AAGGCTTGGGAACAACAACTATTGCCAAGCAACTAACAAAACGAGGACTTAAAACCCCAGGAGGAAAATCCAAATGGAGT
GCACGTACGGTTTACAGTATCCTTCAAAACGAAAAGTACAAGGGAGATGCACTTCTACAAAAAAGCTATACGGTTGATTT
TCTTACAAAGAAAACGAAAATCAACGAAGGGGAAGTCCCCCAATACTATGTAGAGCATGACCATGAAGCCATTATTGAAC
CTCAGACTTTTGAAATGGTGCAAGCGGAACTGAAACATAGAAATAAAGCACGGAAGTACTTCAGTGGTACTAGCATCTTT
TCCACGAAAATCCAGTGTGCTGAGTGCGGAGGGTGGTACGGGGCGAAAGTCTGGCACTCCAACGATAAGTACCGCCGCAT
CATTTATCAGTGCAACAACAAGTTCCGCAACAAGACGGGATGCAGGACACCGCATCTGACGGAAGAGGAAATCAAGGCGT
ATTTCGTCCGAGCGATGAACCAGATAATCGCGGATAAGGACGAAATCATCCAGACAATCGAGGATGCTAGGCAGGTGATC
TGTGACAACGGAGACCTTCTAGCCAAACGAGATGCCATGCAGAAGGAAATCGGCATCCTGGTGGAAATGGCCCAGAATGC
TGTGGAACGGAATGCACGGGTAGCACAGAACCAGGAAGAGTACCAAAAACAGTATGATGACATCATCAGCCGCTATGATG
CAATGAAAACTGAGTACGAACAACTGTGTGAGAAGATTGAAAACCGCCAGGATCGGAATGAGCAGCTTGGACGGTTCATT
CAGGAACTGAAAGGTCGGGATAGCCTGCTCACCGAATTTGACCAGTCACTTTGGTGTGTTCTGGTCGACAAGATGGTAGT
GAAAGACAAAGAGAATGTCACTGTGGTCTTTCAAGACGGAACGGAAATCAAGGCATAA

Protein sequence :
MAKTVRAIPATISRYTSSPINSRKKRKVAGYARVSTDHDDQITSYEAQVDYYTNYIKGRDDWEFVGIYTDEGISGTNTRH
RDGFKRMVNDALEGKIDLIITKSVSRFARNTVDSLSTIRKLKEHKIECYFEKENIWTFDSKGELLLTIMSSLAQEESRSI
SENVTWGHRKRFADGKVSVAYSRFLGYKKGPNGGLVVVPEEATTIKLIYKLFLEGLGTTTIAKQLTKRGLKTPGGKSKWS
ARTVYSILQNEKYKGDALLQKSYTVDFLTKKTKINEGEVPQYYVEHDHEAIIEPQTFEMVQAELKHRNKARKYFSGTSIF
STKIQCAECGGWYGAKVWHSNDKYRRIIYQCNNKFRNKTGCRTPHLTEEEIKAYFVRAMNQIIADKDEIIQTIEDARQVI
CDNGDLLAKRDAMQKEIGILVEMAQNAVERNARVAQNQEEYQKQYDDIISRYDAMKTEYEQLCEKIENRQDRNEQLGRFI
QELKGRDSLLTEFDQSLWCVLVDKMVVKDKENVTVVFQDGTEIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 7e-84 43
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 7e-84 43
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 1e-88 41