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Name : Acin_1875 (Acin_1875) Accession : YP_004897224.1 Strain : Acidaminococcus intestini RyC-MR95 Genome accession: NC_016077 Putative virulence/resistance : Unknown Product : Site-specific recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 1899458 - 1901035 bp Length : 1578 bp Strand : - Note : COG1961 DNA sequence : ATGGCAAAAACAGTAAGAGCGATTCCGGCAACAATCAGCCGTTATACATCATCTCCGATTAATAGTCGGAAGAAAAGAAA AGTAGCAGGTTACGCACGGGTTTCAACAGACCACGATGATCAGATTACCAGCTATGAAGCCCAAGTGGATTATTATACAA ACTATATCAAAGGGCGGGATGACTGGGAATTTGTAGGTATCTATACGGATGAAGGAATCTCTGGTACAAATACCCGCCAT CGTGATGGATTCAAGCGAATGGTCAATGATGCTCTGGAAGGAAAAATCGACCTGATCATCACAAAGTCTGTCAGCCGCTT TGCTAGAAATACCGTCGATAGCCTTTCCACTATTCGGAAATTAAAAGAACACAAAATAGAGTGCTACTTTGAAAAGGAAA ATATCTGGACTTTCGACAGCAAGGGAGAATTGCTCCTGACGATCATGAGTTCCCTGGCCCAGGAAGAAAGCCGGAGTATT TCAGAAAATGTCACCTGGGGTCATCGGAAGCGGTTTGCCGATGGCAAAGTCAGCGTCGCTTACAGCCGTTTCCTGGGATA CAAGAAAGGCCCGAACGGTGGGCTAGTAGTTGTACCAGAAGAAGCAACAACGATCAAGCTCATCTACAAGCTATTCCTAG AAGGCTTGGGAACAACAACTATTGCCAAGCAACTAACAAAACGAGGACTTAAAACCCCAGGAGGAAAATCCAAATGGAGT GCACGTACGGTTTACAGTATCCTTCAAAACGAAAAGTACAAGGGAGATGCACTTCTACAAAAAAGCTATACGGTTGATTT TCTTACAAAGAAAACGAAAATCAACGAAGGGGAAGTCCCCCAATACTATGTAGAGCATGACCATGAAGCCATTATTGAAC CTCAGACTTTTGAAATGGTGCAAGCGGAACTGAAACATAGAAATAAAGCACGGAAGTACTTCAGTGGTACTAGCATCTTT TCCACGAAAATCCAGTGTGCTGAGTGCGGAGGGTGGTACGGGGCGAAAGTCTGGCACTCCAACGATAAGTACCGCCGCAT CATTTATCAGTGCAACAACAAGTTCCGCAACAAGACGGGATGCAGGACACCGCATCTGACGGAAGAGGAAATCAAGGCGT ATTTCGTCCGAGCGATGAACCAGATAATCGCGGATAAGGACGAAATCATCCAGACAATCGAGGATGCTAGGCAGGTGATC TGTGACAACGGAGACCTTCTAGCCAAACGAGATGCCATGCAGAAGGAAATCGGCATCCTGGTGGAAATGGCCCAGAATGC TGTGGAACGGAATGCACGGGTAGCACAGAACCAGGAAGAGTACCAAAAACAGTATGATGACATCATCAGCCGCTATGATG CAATGAAAACTGAGTACGAACAACTGTGTGAGAAGATTGAAAACCGCCAGGATCGGAATGAGCAGCTTGGACGGTTCATT CAGGAACTGAAAGGTCGGGATAGCCTGCTCACCGAATTTGACCAGTCACTTTGGTGTGTTCTGGTCGACAAGATGGTAGT GAAAGACAAAGAGAATGTCACTGTGGTCTTTCAAGACGGAACGGAAATCAAGGCATAA Protein sequence : MAKTVRAIPATISRYTSSPINSRKKRKVAGYARVSTDHDDQITSYEAQVDYYTNYIKGRDDWEFVGIYTDEGISGTNTRH RDGFKRMVNDALEGKIDLIITKSVSRFARNTVDSLSTIRKLKEHKIECYFEKENIWTFDSKGELLLTIMSSLAQEESRSI SENVTWGHRKRFADGKVSVAYSRFLGYKKGPNGGLVVVPEEATTIKLIYKLFLEGLGTTTIAKQLTKRGLKTPGGKSKWS ARTVYSILQNEKYKGDALLQKSYTVDFLTKKTKINEGEVPQYYVEHDHEAIIEPQTFEMVQAELKHRNKARKYFSGTSIF STKIQCAECGGWYGAKVWHSNDKYRRIIYQCNNKFRNKTGCRTPHLTEEEIKAYFVRAMNQIIADKDEIIQTIEDARQVI CDNGDLLAKRDAMQKEIGILVEMAQNAVERNARVAQNQEEYQKQYDDIISRYDAMKTEYEQLCEKIENRQDRNEQLGRFI QELKGRDSLLTEFDQSLWCVLVDKMVVKDKENVTVVFQDGTEIKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 7e-84 | 43 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 7e-84 | 43 |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-88 | 41 |
