Gene Information

Name : ampC (Acin_1310)
Accession : YP_004896674.1
Strain : Acidaminococcus intestini RyC-MR95
Genome accession: NC_016077
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2367
EC number : 3.5.2.6
Position : 1346401 - 1347213 bp
Length : 813 bp
Strand : +
Note : COG2367

DNA sequence : 
ATGGTTTTCTGCCTTCAGGATTGTCAAGCGCGGCAGAAATTAAATCTTGCTGATCTGGAAAATAAATATAACGCCGTGAT
TGGTGTTTACGCCGTTGACATGGAGAATGGAAAAAAAATTTGCTACAAACCTGATACGCGTTTTTCCTACTGCTCGACAC
ACAAAGTTTTTACGGCTGCAGAATTGCTAAGACAAAAAAATACCTCCGATTTGAATGAAATTCGTAAGTTTTCGGCGGAA
GATATTTTGTCCTACGCGCCAATCACCAAAGACCATGTTGCTGATGGCATGACGCTGGCGGAAATTTGTTCGGCATCGCT
CAGGTGGAGTGACAACACGGCGGCAAATTTAATTTTGCAGGAGATCGGCGGCGTGGAAAATTTCAAGGTGGCACTTAAAA
ATATTGGCGACAAAACTACCAAACCTGCGCGAAATGAACCTGAACTTAATCTTTTCAATCCAAAAGATAATCGTGATACT
AGCACGCCGAGACAGATGGTAAAAAATTTGCAAGTCTATATATTCGGCGATATTTTGAGCGACGACAAGAAAAAACTGCT
GATTGATTGGATGAGCGACAATTCCATAACCGACACGCTTATCAAGGCAGAAACTCCGCAAGGTTGGAAAGTTATCGACA
AGAGCGGTTCAGGCGATTATGGGGCGCGGAATGATATTGCCGTGATTTATCCGCCCAATCGCAAACCCATTGTCATGGCG
ATAATGTCGCGCCGCACGGAAAAAAATGCAAAATCTGACGACGCTATGATTGCGGAGGCGGCAAAACGAATTTTTGATAA
TTTAGTATTTTAA

Protein sequence : 
MVFCLQDCQARQKLNLADLENKYNAVIGVYAVDMENGKKICYKPDTRFSYCSTHKVFTAAELLRQKNTSDLNEIRKFSAE
DILSYAPITKDHVADGMTLAEICSASLRWSDNTAANLILQEIGGVENFKVALKNIGDKTTKPARNEPELNLFNPKDNRDT
STPRQMVKNLQVYIFGDILSDDKKKLLIDWMSDNSITDTLIKAETPQGWKVIDKSGSGDYGARNDIAVIYPPNRKPIVMA
IMSRRTEKNAKSDDAMIAEAAKRIFDNLVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaZ YP_253679.1 beta-lactamase Not tested ¥ÕSh1 Protein 1e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ampC YP_004896674.1 beta-lactamase AF367983.gene.p01 Protein 1e-55 44
ampC YP_004896674.1 beta-lactamase M60253.gene.p01 Protein 5e-46 43
ampC YP_004896674.1 beta-lactamase NC_002952.2859819.p0 Protein 5e-46 43
ampC YP_004896674.1 beta-lactamase NC_007931.3978604.p0 Protein 2e-45 43
ampC YP_004896674.1 beta-lactamase NC_005951.2853409.p0 Protein 7e-46 43
ampC YP_004896674.1 beta-lactamase NC_005054.2598287.p0 Protein 5e-46 43
ampC YP_004896674.1 beta-lactamase NC_005127.2610354.p0 Protein 3e-44 43
ampC YP_004896674.1 beta-lactamase NC_003140.1122765.p0 Protein 2e-45 43
ampC YP_004896674.1 beta-lactamase NC_005011.2598316.p0 Protein 7e-46 43
ampC YP_004896674.1 beta-lactamase NC_010066.5774791.p0 Protein 8e-43 42
ampC YP_004896674.1 beta-lactamase NC_010063.5774822.p0 Protein 3e-45 42