Gene Information

Name : pyk (TEH_08980)
Accession : YP_004886389.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 899630 - 901396 bp
Length : 1767 bp
Strand : +
Note : The N-terminus of this ORF was identified by Edman sequencing.

DNA sequence :
ATGAAAAAAACAAAAATCGTAAGTACCTTAGGACCTGCTAGTAATTCGGTAGATACGATCGCAAAATTGATTGAAGCTGG
AGCGAACGTTTTTCGTTTTAACTTTTCTCATGGTGATCACGATGAGCATTTAGATCGCATGGATAAAGTGCATCAAGCAG
TTGAAAGAACTGGAATAGACGTAGGGATTCTTTTGGATACAAAAGGTGCTGAAATCCGGACAACAGCTCAAGCTACTGAA
ACAGGTAAGATCCCTTTTGAGATCGGCGATAGAGTACGTATTGCAATGGATGCGGAATTAGAAGGTACAAAAGACAAAAT
TTCTGTTACTTATGAAGGTCTTTTTGATGATGTTCATGAAGGTGGACACGTGTTATTTGATGATGGTCTAATTGACATGC
TTATTTTAGAAAAAGATGAAAGCAATCGGGAACTAGTTACTGAAGTGCAAAACCCTGGGATTTTGGGTTCACGTAAAGGC
GTGAATGCGCCAGGTGTTTCTATCAGCTTACCTGGAATCACTGATAAAGATGCTGATGATATTCGTTTTGGCTTGCAGCA
TAATATTAACTATATTGCAGCAAGTTTTGTACGTAAAGCACAAGACGTATTAGATATTCGGGAGATTTTAGAAGAAACAG
GAATGACTCATGTTCAAATCTTTCCTAAGATTGAATCTCAAGAAGGTATTGATAATATTGATGAAATACTGAAAGTTTCC
GACGGTATTATGGTTGCCCGAGGCGACATGGGTGTTGAAATTCCTTCTGAATTAGTCCCTATGGCGCAAAAAAATATTAT
TAAAAAATGTAATGCTGCAGGTAAATCAGTTATTACAGCAACACAAATGTTAGAATCTATGCAAGAAAATCCACGTCCGA
CCCGTGCAGAAGCTTCTGACGTTGCTAACGCTGTTTTTGACGGAACAGACGCAACTATGCTTTCTGGCGAATCAGCTAAT
GGAAGCTATCCAGTTGAAGCTGTTACCACTATGGCTCGTATTGATGTAGAAGCAGAAAAATCAATGTTACAACTTGGTTC
TTACCAAATTAACCAATTTGATAAAACGGATGTTACGGAAACAATTGGTCTTTCTGTAGCACGTGCTGCCAAGAATTTGG
GTGTTAAATGTATCGTAGCTGCGACTGAATCTGGTCATACAGCTAAGATGATTTCAAAATATCGTCCAGATGCAGATATT
TTGGCTGTAACTTTTGATGACCATACTAAACGCGGTCTGATGTTAAACTGGGGCGTTTATCCAACAGTTACAGAAAAGCC
TGAAACAACGGATGATATGTTTGAATTAGCAACAAAGAAAACATTGGAATTAGGTTTTGCTAAAGAAGGCGATTCGATTT
TGATTACTGCTGGTGTACCTGTGGGCGAACGTGGTACAACAAACGTTATGAAGATCCAAATGATTGGCTCAAAATTAATT
GAAGCCCAAGGCGTTGGCGATCATTCAGTAGTTGCTAATACTGTTGTAGCTAAGAATGCTGAAGAAGCTGTGGCTAAAGC
TAAAGATGGAATGGTTCTAGTTGTACCATCAACAGATAAAGAATACATGCCAGCTATTGAAAAAGCAGCTGCTTTAGTTG
TAGAAGAAAGTGGTTTGACTTCACATGCGGCAGTTGTTGGTGTAACCCAAGACTTACCTGTCATTGTGGGTGCTAAAGAT
GCTTTGAATATTATTAATGATGGTGAATTAGTAACAATTGATTCTCGTCGTGGCATTGTTTACCGTGGAGAAACGATGGC
AGTTTAA

Protein sequence :
MKKTKIVSTLGPASNSVDTIAKLIEAGANVFRFNFSHGDHDEHLDRMDKVHQAVERTGIDVGILLDTKGAEIRTTAQATE
TGKIPFEIGDRVRIAMDAELEGTKDKISVTYEGLFDDVHEGGHVLFDDGLIDMLILEKDESNRELVTEVQNPGILGSRKG
VNAPGVSISLPGITDKDADDIRFGLQHNINYIAASFVRKAQDVLDIREILEETGMTHVQIFPKIESQEGIDNIDEILKVS
DGIMVARGDMGVEIPSELVPMAQKNIIKKCNAAGKSVITATQMLESMQENPRPTRAEASDVANAVFDGTDATMLSGESAN
GSYPVEAVTTMARIDVEAEKSMLQLGSYQINQFDKTDVTETIGLSVARAAKNLGVKCIVAATESGHTAKMISKYRPDADI
LAVTFDDHTKRGLMLNWGVYPTVTEKPETTDDMFELATKKTLELGFAKEGDSILITAGVPVGERGTTNVMKIQMIGSKLI
EAQGVGDHSVVANTVVAKNAEEAVAKAKDGMVLVVPSTDKEYMPAIEKAAALVVEESGLTSHAAVVGVTQDLPVIVGAKD
ALNIINDGELVTIDSRRGIVYRGETMAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-89 47
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-89 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-89 47
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-89 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_004886389.1 pyruvate kinase VFG0479 Protein 9e-90 47