Gene Information

Name : TEH_08260 (TEH_08260)
Accession : YP_004886317.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : putative phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 842762 - 843940 bp
Length : 1179 bp
Strand : -
Note : -

DNA sequence :
GTGAAAAATAAAGGGCCAATAAAGGAGTATAAAATTGCGAACGGCGAAACGCGATATAAATTTAAAGTATACTTAGGGAT
TAACCCTTATACAGGAAAGGAAGTACGCCCTAATCGACGCGGATTTAAAACAAGACGAGAGGCCAGCATAGAACTAAAAC
GTTTAAAAGCAAATTGGTTAGAAGACATTGAAAGCCAATATAATAAACAGAAAGAGCTTGAAAATAAAGGAAAAACATTT
GAAGAAGTTTACGATATATGGTTAGATGAATATATACCTAACGTAGATAAATCCACGCTTTTTAAAACGAAGCAATTGTT
TGATAATCATATACTCCCAGCTTTTGGTAATTTGTATATTAAAGATATAACGGCCATGGATGCACAAAAACAAATGAATG
CTTGGCAAAAAGAATTTGTTAAAGCCTCTACTATAATGAGTTACGCAGGACTTGTTTTTGATTGTGCAGTAAGGTTAGAA
GAAATTTCATCAAATCCAATTAGCGCAATCAGAAAACCGTCAAAAAAGAAAGAATCTAAAAAAGATGCTTCTTTTAATTT
TTACGATAAAGAAGAACTAAAAGAGTTTATGGCAGCTGCTGAAATGTCTTCAAATAAAAAGGCTTATGTATTTTTCAGGT
TGTTAGCTTTTACCGGGATACGTCGTGGGGAAATTTTAGCATTGCGATGGTACGATATAGACTTTAATGAACAAACTTTG
TCCATTAATAAAGCCATAGCGCACAGCGAAACAGGATTATACGAAAAAGATGTTAAAACGAAAGCAAGTAATAGAGTTAT
CTCTATTGATGATATTACAACGAAAATATTGAAAGAATTTCAAGGAGTATCAGATAAAGAAGTCAGAATTTTTCCTGCCG
AAAACGGTGGTATACTATCGCCAGCAAAACCTAGGAAGTGGCTATACACTATCCAAAATTATATAGATAAAAAAAGAAAA
GAAAATGAAGAAGATGCCAAACCCATGAAAAGAATTACAACACACGGCTTTCGACATACACATGCCAGTTTGTTATTCGA
AGCTGGTGCGTCTATAAAGGATGTGCAATATCGATTGGGCCATAGTGATATAAAAACAACCATGGATACATACACTCATG
TAACAAAACAAGCTAAAGAAAATTTAGCGAATAATTTTAATGATTATGTCGATTTTTAA

Protein sequence :
MKNKGPIKEYKIANGETRYKFKVYLGINPYTGKEVRPNRRGFKTRREASIELKRLKANWLEDIESQYNKQKELENKGKTF
EEVYDIWLDEYIPNVDKSTLFKTKQLFDNHILPAFGNLYIKDITAMDAQKQMNAWQKEFVKASTIMSYAGLVFDCAVRLE
EISSNPISAIRKPSKKKESKKDASFNFYDKEELKEFMAAAEMSSNKKAYVFFRLLAFTGIRRGEILALRWYDIDFNEQTL
SINKAIAHSETGLYEKDVKTKASNRVISIDDITTKILKEFQGVSDKEVRIFPAENGGILSPAKPRKWLYTIQNYIDKKRK
ENEEDAKPMKRITTHGFRHTHASLLFEAGASIKDVQYRLGHSDIKTTMDTYTHVTKQAKENLANNFNDYVDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAPIG0469 YP_005733279.1 integrase Not tested SAPI-S0385 Protein 1e-60 42
SAOV_0414c YP_005735930.1 integrase Not tested SaPI1 Protein 8e-61 42
SAB0342c YP_415844.1 integrase Not tested SaPIbov Protein 8e-61 42
unnamed AAG29618.1 integrase-like protein Not tested SaPIbov Protein 6e-61 42