Gene Information

Name : TEH_08110 (TEH_08110)
Accession : YP_004886302.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 827787 - 828509 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGTATTAATGATCGAAGATAATGAATCTGTTTGTGAAATGATGCAGATGTTTTTTGTAAATGAAGGGTGGGAAGT
GACTTTTAAATATGATGGACAAACCGGAATTGATGCTTTTTTAGAGAATCCACAAAATTGGGATATGATTATACTAGATT
TAAATTTGCCTGAGGTAGATGGCATGGTTGTAGCTCGTAAAATTCGCGAAGTTTCTAGTACGGTACCATTAGTGATGCTA
ACGGCTAGAGATTCAGAAAGTGACCAAGTGATTGGTCTTGAAATTGGCGCTGATGATTACGTAACTAAACCTTTTAGCCC
GCTGACTTTAATTGCACGAATAAAGGCGCTGCATCGTCGTAGTGATTTAAGAAGTACCGCAACAACTAAAGAGGTTTCGA
AAAATGATACGGAATTTGATGTAAAAACAGCACATTTTCAAATGAATACAAAAACAAGAGAAGCTTATTTAAATGGCGCA
GAGATTGTTGATCTAACGCCTAAAGAATTTGATTTGCTTTACACATTAGCAAATAAGCCGCGACAAGTATTTTCCCGCGA
AAAATTACTTGAGTTAGTGTGGGATTATCAATACTTTGGTGATGAACGAACAGTAGACGCTCATATCAAAAAGTTACGGC
AAAAGATTGAAAAAATTGGACCACAAGTGATTCAAACGGTTTGGGGCGTTGGCTATAAGTTTGATGATTCGGGTGTTGAA
TAA

Protein sequence : 
MNVLMIEDNESVCEMMQMFFVNEGWEVTFKYDGQTGIDAFLENPQNWDMIILDLNLPEVDGMVVARKIREVSSTVPLVML
TARDSESDQVIGLEIGADDYVTKPFSPLTLIARIKALHRRSDLRSTATTKEVSKNDTEFDVKTAHFQMNTKTREAYLNGA
EIVDLTPKEFDLLYTLANKPRQVFSREKLLELVWDYQYFGDERTVDAHIKKLRQKIEKIGPQVIQTVWGVGYKFDDSGVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-37 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TEH_08110 YP_004886302.1 OmpR family two-component response regulator NC_012469.1.7685629. Protein 6e-43 44
TEH_08110 YP_004886302.1 OmpR family two-component response regulator HE999704.1.gene2815. Protein 8e-43 43
TEH_08110 YP_004886302.1 OmpR family two-component response regulator NC_002952.2859905.p0 Protein 3e-38 41
TEH_08110 YP_004886302.1 OmpR family two-component response regulator NC_007622.3794472.p0 Protein 2e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TEH_08110 YP_004886302.1 OmpR family two-component response regulator VFG1563 Protein 2e-37 41
TEH_08110 YP_004886302.1 OmpR family two-component response regulator VFG1702 Protein 2e-37 41
TEH_08110 YP_004886302.1 OmpR family two-component response regulator VFG1389 Protein 2e-30 41