Gene Information

Name : TEH_05420 (TEH_05420)
Accession : YP_004886033.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 556146 - 557261 bp
Length : 1116 bp
Strand : -
Note : fragment

DNA sequence :
GTGGAAGCGAACGCGAATAAGTATACTTTTGTTTGGAAGAAAGCGGTCGATCGCTTCTATCCTAAATTAAAAGAAAAAGA
AATGAAAATTTATGAGGAAGAAATCGCGCCTTTGATCGAACAGGAAATGATACGAGAAAATAACGACGCATTTACAAAAG
AAGAAATTTTCACGTTAAATGATCTTTTACAAGAAGAAATTGAAAAAGTAAACGAAGAATTACAAACGGTTACAAAGAAA
GAACAAAGCAGCTCTTTAAAGAAAAAACGTCGTCAGTTAAAAAAGTACCGAAACCAATGTCATAATGATTTTATTCCCAG
AGAGCAGAAATACGAAAGGTATTATAAAACGTTTAAAGGACGAAATAGTTTTTCTAAAACCGATCCCGACGCAACTTTTA
TGCGTATGAAAGATGACGCTATGATGAATGGGCAATTGAAAGCTGGTTATAATGTGCAAATTGCGACAGAAAACCAGTTC
GTTTTGCATACCCAAATTTATCCCAATCCAACGGATACCCAAACATTGATTCCTTTTATGAATACTTTTCCAGAGAGCGT
AAAACCTTCGACCTATGTGGTCGCAGATGCTGGCTATGGCAGCCAAGAGAATCTTGAATTCCTAGAAAGTTCACCTTGGA
CGGGAATCGTAAAATATGGCATGTATGAAAAAGAGCAAAAACGGAAATATCTTCAATCAGAAAAAAATTTAGCCAACTGG
ACCTACATACAAGAAGAAAATGCTTATGTCCATCCCGATGGGACGTATTACGCCTTTGATTATATTCGACGGCAGAAAAC
GAACACCGGATATGTAAGGTTTTCTCATGTTTATCGCTCAACGGACCCTTTTTATCAAAACGGGAAAAAGTCTTTATGGA
TAAACTACGACTATGAAGCCCACAAATTAAAAATCAAAGAAAAGCTTTCATCAAAAGAAGGCGCGAAACGTTACGGACAG
CGTAAAATCGATGTGGAACCCGCCTTTGGACAAGTGAAGGCGAATTTAGGTTTCACTCGATTTTCTGTCCGTGGGCAATC
TAAGGTGGAAAATGAAACCCAACTGATCTTTATGGCGAATAATCTACGAAAATACCATAAAAGAAAAGAGAAATAA

Protein sequence :
MEANANKYTFVWKKAVDRFYPKLKEKEMKIYEEEIAPLIEQEMIRENNDAFTKEEIFTLNDLLQEEIEKVNEELQTVTKK
EQSSSLKKKRRQLKKYRNQCHNDFIPREQKYERYYKTFKGRNSFSKTDPDATFMRMKDDAMMNGQLKAGYNVQIATENQF
VLHTQIYPNPTDTQTLIPFMNTFPESVKPSTYVVADAGYGSQENLEFLESSPWTGIVKYGMYEKEQKRKYLQSEKNLANW
TYIQEENAYVHPDGTYYAFDYIRRQKTNTGYVRFSHVYRSTDPFYQNGKKSLWINYDYEAHKLKIKEKLSSKEGAKRYGQ
RKIDVEPAFGQVKANLGFTRFSVRGQSKVENETQLIFMANNLRKYHKRKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 1e-41 42
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 1e-41 42
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 1e-41 42
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-41 42
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-41 42