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Name : opuABC (TEH_03680) Accession : YP_004885859.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Unknown Product : glycine betaine ABC transporter permease/glycine betaine-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4176 EC number : - Position : 379149 - 380897 bp Length : 1749 bp Strand : + Note : - DNA sequence : ATGTCGAGGTGTCCGCCCATTATTAATTTTTTAGAAACTTCGATACCGATAGCTGACTGGGTAGATCGTATTGTTGATTG GTTAACTGAACATCTTGCCTTCTTTTTTTCAATGATTCAAACAATCGGGCAATTTGTGATGGATACTCTATCCAATGGAC TATCTGTAATTCCGCCAATGATAATGATTTTGCTATTAACGGTAGCGACCTACTTTATTTTTAAAAAACGGTGGCAGATG CCCGTCTTCGTTTTGATTGGTTTATTATTTATTTACAATCAAGACATGTGGTCAGATCTGATGTACACATTGACATTAGT CATTTTATCAAGTTTAATTTCTGTAATGATTGGGATACCATTGGGAATTTTGATGGCTAAAAGTAATAAAGTAGAAATTG TCATAAAACCGATTTTAGATATCATGCAGACCATGCCTGGTTTTGTCTATTTGATACCAGCAGTCGCCTTTTTTGGCATT GGTATGGTTCCTGGTGTGTTTGCTTCAGTTATTTTTGCTTTACCTCCAACTGTAAGATTAACCAACTTGGGAATTCGCCA AGTGGATGAGGAGTTAAAAGAAGCTTCTGATTCCTTTGGCGGAACGCTTTGGCAAAAACTTTATAAACTAGAAATGCCTC TTGCTAAAGGAAGTATTTTTGCTGGGATTAACCAAACCATCATGCTCAGTCTATCTATGGTAGTCATTAGCTCTATGATT GGCGCACCAGGATTGGGACAAGGCGTTTTAGCAGCAGTACAACGTTCTGAAGTTGGGAATGGTTTTGTTTATGGCGTAGG TATTGTCATTTTAGCGATTCTAATGGATCGTGTGGCGCAACGAATGAACCAACCAAGTAAAAAACAAGCCAATCTAGTTG TCAAAACGACCAAGCGACGTAAGCAATTGGTTGGCGGACTTGTTGTTGCAGCAGTTGCTTTGATTACAGTGCTTGGCTTA ACTGTTCCCGGTCGTTCAAATAAAGGGACCATTACCTTATCTTATATCAATTTAGATACCGAACTGGCTTCGACAAATGT CATTGCTCAAGTCTTAAGAAACGAAGGTTATGAAGTGAATACTATCGCTTTAGATATTCCCGTGATGTGGGAAGCTGTAG CCAACGGCGAAGCCGATGCCATGGTTGGTGCCTGGCCGGCAACCAATCAAATCCAATATGATATGTTTAGTGACCAAATG GATAAATTAGGTGCAAATTTAGAAAAAAGCGCTCAAACTGGTTTGGTTGTTCCTGCTTACATGGAAGATGTTGAAAGTAT TGAGGATTTAACCGACCAAGCTGACCAAGAAATCGTGGGCGTTGAGCCCGGTACAGGGACTTCAGACGCTACTGATGAAA CGATTGAGGCTTACCCGAATTTATCTGATTGGGAACAAGTCAATTCTTCAACTGCAGCCATGATTGCTGAATTAGATCAA GCGATTAAACAAGAAGAACCCATTGTGGTTTCAATCTTTGCCCCGCATTGGATTTTTTCACGCTATGATTTAACGATGTT AGAAGATCCCAAAGAAACTATGGGAGAACCTGAAAATATTGAAACCATGGCACGAGAAGGGTTAGAAGAAGACGAACCAG AAGCTTATCAAATACTAGATAATTTTCAGTGGGAAATTGACGATATTCAATCTGTGATGTTAGAAATAGAAAATGGCGCT GAACCTGAAGAGGCAGCGCAAAACTGGATTAGTGAAAATTCAGAAAAAGTTGAGCATTGGACTGAATAA Protein sequence : MSRCPPIINFLETSIPIADWVDRIVDWLTEHLAFFFSMIQTIGQFVMDTLSNGLSVIPPMIMILLLTVATYFIFKKRWQM PVFVLIGLLFIYNQDMWSDLMYTLTLVILSSLISVMIGIPLGILMAKSNKVEIVIKPILDIMQTMPGFVYLIPAVAFFGI GMVPGVFASVIFALPPTVRLTNLGIRQVDEELKEASDSFGGTLWQKLYKLEMPLAKGSIFAGINQTIMLSLSMVVISSMI GAPGLGQGVLAAVQRSEVGNGFVYGVGIVILAILMDRVAQRMNQPSKKQANLVVKTTKRRKQLVGGLVVAAVALITVLGL TVPGRSNKGTITLSYINLDTELASTNVIAQVLRNEGYEVNTIALDIPVMWEAVANGEADAMVGAWPATNQIQYDMFSDQM DKLGANLEKSAQTGLVVPAYMEDVESIEDLTDQADQEIVGVEPGTGTSDATDETIEAYPNLSDWEQVNSSTAAMIAELDQ AIKQEEPIVVSIFAPHWIFSRYDLTMLEDPKETMGEPENIETMAREGLEEDEPEAYQILDNFQWEIDDIQSVMLEIENGA EPEEAAQNWISENSEKVEHWTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuABC | YP_281522.1 | glycine betaine-binding protein/glycine betaine transporter permease | Not tested | Not named | Protein | 2e-137 | 53 |
