|
Name : busAB (TEH_03180) Accession : YP_004885809.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Unknown Product : glycine betaine ABC transporter permease/glycine betaine-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4176 EC number : - Position : 329311 - 331068 bp Length : 1758 bp Strand : + Note : - DNA sequence : ATGCTTGATTTTCTACAAAATGAGATTCCTTTATCAGAATGGGTAGATAATGGCGTTGATTGGTTAACCGAACATTGGGC GGCATTTTTCTCATTCTTACAATCGTTGGGACAAACCATCATGGATGGAATGACCTCTGGTTTGTCATTTATCCCACCAT TGCTTTTTATTGTATTAGCTACTATAGCTGCATTTTTCCTTGGTGGAAAAAAATGGCAATTGCCTACATTTACATTGCTC GGTTTACTACTTGTTTATAACCAAGGTTTATGGAGCGATCTGTTAAATACAGTCACATTGGTTATTGTGGCTAGCGTGAT CTCAATAATTATCGGAGTTCCAGTAGGAATTTTAATGTCTAAAAATGAAACGGCAAAGAATATTATTACGCCGATTCTGG ACTTTATGCAAACTATGCCTAACTTTGTTTATTTGATCCCAGCAGTTGCTTTCTTTGGTATTGGGATGGTTCCTGGGGCA TTTGCTTCAGTGATCTTTTCTTTGCCGCCAACTGTACGGATGACAAACTTAGGTATTCGCCAAGTGCCAACTGAATTAAC TGAAGCTTCGGATTCATTTGGTGGTACGAACTGGCAAAAATTATTTAAATTAGAATTACCCCTAGCTAAGGGCAATATCT TTGCCGGCATTAACCAAACGATGATGCTAGCATTATCCATGGTTGTTGTTGCTTCAATGATCGGAGCACCTGGACTTGGA CAAGGCGTATTATCCGCTGTACAACGTTCTCAAGTAGGTAGCGGCTTTGTTTATGGTATCGCAGTTGTTATTTTAGCAAT TATTTTGGACCGTTTTACACAAAAATTGAATTCAAGTAAAGCTAAAACGAGTGAAAATGCGTCCACTAAAAAATCAAAAC GTAATAAGATTATTGCTGGCGTTGTTGTTGTAGCAGCCGTTATTGCAGCGATCTTTGCTTATACAAGTATGTCAGGTAAT GATTCAAGTGGTGCTAGCTCTGAAGAGGCCGGTAATATTAACCTTTCTTATGTTGAATGGGATACAGAAGTCGCTTCAAC CAATGTCTTAGCACTTGTTTTAGAAGACCAAGGATATAATGTCACACAAACGCCTTTGGATAACGCGGTAAACTGGGAAG CTGTAGCTAATGGAGAATCTGATGCGACACTTTCTGCTTGGTTACCAGTGACGCAAAAAGCGCAATATGATCAATTTAAA GATCAAGTAGATGAATTAGGTCCACATACAGAAGGTGCTAATCTTGGCCTTGCTGTGCCAGAATACATGGACGTAGATTC GATTGAAGATTTAGATGACCAAGTACCAGATCAAGAAATTATCGGTATCGACCCAGGTGCTGGTGTCGTTTCTGCAGCAG AAGATACAGTTGAAAGTTATGATAACTTATCTGATTGGGAAGTAACACCATCTTCTAGCGGTGCGATGACTTCACAATTA GGTAGTGCTATCAATAATGAGGATCCTATCGTTATCACTGGCTGGTCTCCACATTGGATGTTCCAAAGATATGATCTAAA ATATCTGGATGACCCACAAGGAACGATGGGAGAAGAAGAGCATATTGATGCATTAGCTCGTGAAGGCTTAGAAGACGATA TGCCAGAAGCTTATCAAATAATAGATAACTTTAACTGGGATACAGAAGATATGGAAAATGTTATGTTAGATATTGAAGAA GGCGCATCTCCTGAAGACGCAGCGCAAGATTGGATTGATGACAATCCAGATAAAGTTGAAGAGTGGATAGAAGAATAA Protein sequence : MLDFLQNEIPLSEWVDNGVDWLTEHWAAFFSFLQSLGQTIMDGMTSGLSFIPPLLFIVLATIAAFFLGGKKWQLPTFTLL GLLLVYNQGLWSDLLNTVTLVIVASVISIIIGVPVGILMSKNETAKNIITPILDFMQTMPNFVYLIPAVAFFGIGMVPGA FASVIFSLPPTVRMTNLGIRQVPTELTEASDSFGGTNWQKLFKLELPLAKGNIFAGINQTMMLALSMVVVASMIGAPGLG QGVLSAVQRSQVGSGFVYGIAVVILAIILDRFTQKLNSSKAKTSENASTKKSKRNKIIAGVVVVAAVIAAIFAYTSMSGN DSSGASSEEAGNINLSYVEWDTEVASTNVLALVLEDQGYNVTQTPLDNAVNWEAVANGESDATLSAWLPVTQKAQYDQFK DQVDELGPHTEGANLGLAVPEYMDVDSIEDLDDQVPDQEIIGIDPGAGVVSAAEDTVESYDNLSDWEVTPSSSGAMTSQL GSAINNEDPIVITGWSPHWMFQRYDLKYLDDPQGTMGEEEHIDALAREGLEDDMPEAYQIIDNFNWDTEDMENVMLDIEE GASPEDAAQDWIDDNPDKVEEWIEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuABC | YP_281522.1 | glycine betaine-binding protein/glycine betaine transporter permease | Not tested | Not named | Protein | 3e-148 | 58 |
