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Name : serS (TEH_25210) Accession : YP_004888012.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2534063 - 2535334 bp Length : 1272 bp Strand : + Note : The N-terminus of this ORF was identified by Edman sequencing.; protein synonym:serine--tRNA ligase DNA sequence : TTGTTAGATATTAAAATGATTCGTGAGAATTTCGAACAAGTAAAAGAAAAATTACAAACTAGGGATGTTCCAGAAGAAAC GCTAACCGAATTTCTCCGTTTGGACAAAAAACGCCGTAGTTTGTTAGTGGAAACAGAAGAAATGAAAAAGAATCGTAATA ATGTATCCGAAAAAATTGCGCAAGCAAAGCGTAATAAAGAAGATACTTCTGAACAAATCGCTGAAATGCGTGAAGTAGGT AGCAAAATTAAAGCGTTGGATAAAGAGATTGCAACAATTGACGAAAAATTAAACACCATCGCTACAACTTTACCTAATCT CCCTCATGACAGTGTACCCGTTGGAAAAGATGAAGAGGACAATGTCGAGATTCGCAAATGGGGAGCTTCTCAAACTTTTT CTTTTGAACCTAAAAATCATTGGGAGATTGGTGAAAACTTAAATATACTCGACTTTGAACGAGGAGCAAAAGTTTCTGGT AGCCGTTTTGTTTACTACAAAGGACTGGGCGCTCGTCTAGAACGTGCACTATACAATTTTATGTTAGACCAACATGTATA CCAACAAGGGTATACAGAAATGATTACTCCCTATGCAGTCAATAGTCAAGCGATGTTTGGTACTGGCCAGTTTCCTAAAT TCACTGAAGATGTCTTTCAGTTAGAAGATAGTGGCTTAACTTTGATCCCGACAGCTGAAGTTCCTCTAACAAATTACTAT AGCAACGAGATTTTAGATGTAAGTCAATTACCAGTCTATTTCACTGCCTTAAGCCCAGCTTTTCGTTCAGAAGCAGGAAG TGCTGGCCGCGATACTCGAGGCCTGATCCGTTTACATCAATTTAATAAAGTAGAAATGGTTAAGTTTTCAGATAGCCAGC ATTCTTATGATGAGTTAGAAAAAATGACAGCTGACGCAGAATCTATCCTACAAAAATTAGGACTTTCTTATCGAGTAATG ACTTTATCTACAGGAGATATGGGCTTTTCCGCAGCAAAAACTTATGATCTTGAAGTATGGATTCCAGCACAAAATACTTA TAGAGAAATCAGTTCTTGCTCAAACTGTGAAGATTTTCAAGCGCGGCGTGCAATGATTCGTTACCGCGATACAGAAGGTA AACTCCATTATGCACACACATTAAACGGCTCTGGTTTGGCAGTAGGTCGTACAGTAGCTGCTATTTTAGAAAATTATCAA AATGAAGATGGTTCTGTAACAATTCCTGAAGTTCTCGTACCTTACATGGGCGGCATGACTAAAATTGGATAA Protein sequence : MLDIKMIRENFEQVKEKLQTRDVPEETLTEFLRLDKKRRSLLVETEEMKKNRNNVSEKIAQAKRNKEDTSEQIAEMREVG SKIKALDKEIATIDEKLNTIATTLPNLPHDSVPVGKDEEDNVEIRKWGASQTFSFEPKNHWEIGENLNILDFERGAKVSG SRFVYYKGLGARLERALYNFMLDQHVYQQGYTEMITPYAVNSQAMFGTGQFPKFTEDVFQLEDSGLTLIPTAEVPLTNYY SNEILDVSQLPVYFTALSPAFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDSQHSYDELEKMTADAESILQKLGLSYRVM TLSTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNCEDFQARRAMIRYRDTEGKLHYAHTLNGSGLAVGRTVAAILENYQ NEDGSVTIPEVLVPYMGGMTKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-149 | 71 |
