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Name : lysS (TEH_24470) Accession : YP_004887938.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2447291 - 2448784 bp Length : 1494 bp Strand : - Note : protein synonym:lysine--tRNA ligase DNA sequence : TTGGCAGGAGAACATGAAAACCAAGATGAATTAAATGATCAAATGCTGGTTCGCCGGCAAAAAATGGAAGAACTACAAGA AAAAGGGATAGATCCATTTGGCCATCGTTTCGACCGCACCCACAGTTCAAATGAAATTCATGAAGAATTTGATGATAAAA CGAAAGAAGAACTGAATGAGATAGGACTTGCAGCTAGCGTTGCAGGGCGGATGGTTTCAAAAAGAGGCAAGGGTAAGGTT GGCTTCGCCCATTTGCAAGACCGAGAAGGTCAGATCCAGATTTATGTCCGCAAAGATGAAGTCGGCGAAGATAACTATGA TATCTTTAAAAAAGCCGATTTGGGCGACTTTTTAGGTGTTACTGGTGAAATAATGAAAACAAACACGGGTGAGGTTTCAG TTAAGGCTGAAAAAGTTACACTTTTAACGAAAGCCTTACGTCCCTTACCAGAAAAATATCATGGGTTGACAAATGTTGAA CAACGTTATCGCCAAAGATATTTAGATTTAATCAGTAATCGCGATAGTTTCGAGCGGTTTAAAAAACGTAGTCAAATTAT TAGTGAGATTCGACGCTATTTAGATCATCGTGGATATTTAGAAGTTGAAACACCTGTATTACACAATCAGGCAGGAGGCG CTGCAGCACGTCCATTTGTGACACACCATAATGCTTTAGATATAGACTTATATCTTCGTATTGCTTTAGAGTTGCATTTG AAACGCTTGATTGTAGGCGGAATGGAAAAAGTTTATGAAATCGGACGTGTCTTCCGTAATGAAGGGATCGATACAACCCA TAATCCGGAATTTACTATGTTGGAGTGCTATACAGCTTATGCAAATTTTGGTGATGTTATGGACCTAACAGAAGGTATTA TCCGAAATGTTACTAAAAACGTACTAGGAACAACGCAACTTTCTTACGATGGGCAAACTGTGGACTTAGGGACAGATTTT GCCCGACTTCACATAGTCGATGCGATTAAGGAATATACAGGAGTTGACTTCTGGCAAGATATTTCATTGGAACAAGCAAG AGAACTTGCTAAAAAACATAAAGTGGCGATTACAGACGCAATGGGCGTAGGTCATATTATCAATGAATTTTTTGAAACAT TCGTAGAAGATAACTTGCAACAACCGACCTTTGTTTATGGCCACCCGGTAGAAGTCTCTCCACTAGCTAAGAAGAGCCAA GATGATCCTCGCTTTACTGATCGTTTTGAACTGTTTATAGTAAATCATGAATTTGCTAATGCTTTTACTGAATTAAATGA TCCAATCGATCAACGTAAACGTTTTGAAGAACAAGAAAAAGAACGTATTGCTGGTAATGAGGAAGCACATGGCGTGGACG AAGATTTCTTAGAATCATTGGAATATGGTATGCCCCCTACTGGAGGTTTGGGCATTGGAATTGATCGTTTAATTATGTTG TTAACAGACGCGCAGTCGATTCGGGATGTTTTGCTTTTCCCAACCATGCGATAA Protein sequence : MAGEHENQDELNDQMLVRRQKMEELQEKGIDPFGHRFDRTHSSNEIHEEFDDKTKEELNEIGLAASVAGRMVSKRGKGKV GFAHLQDREGQIQIYVRKDEVGEDNYDIFKKADLGDFLGVTGEIMKTNTGEVSVKAEKVTLLTKALRPLPEKYHGLTNVE QRYRQRYLDLISNRDSFERFKKRSQIISEIRRYLDHRGYLEVETPVLHNQAGGAAARPFVTHHNALDIDLYLRIALELHL KRLIVGGMEKVYEIGRVFRNEGIDTTHNPEFTMLECYTAYANFGDVMDLTEGIIRNVTKNVLGTTQLSYDGQTVDLGTDF ARLHIVDAIKEYTGVDFWQDISLEQARELAKKHKVAITDAMGVGHIINEFFETFVEDNLQQPTFVYGHPVEVSPLAKKSQ DDPRFTDRFELFIVNHEFANAFTELNDPIDQRKRFEEQEKERIAGNEEAHGVDEDFLESLEYGMPPTGGLGIGIDRLIML LTDAQSIRDVLLFPTMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-114 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004887938.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-114 | 48 |
