Gene Information

Name : TEH_23670 (TEH_23670)
Accession : YP_004887858.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Resistance
Product : cadmium resistance regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 2359656 - 2360003 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTATGAAAATGCTTGTGATGTGATCTGTGTACATGAGGATAAAGTTAACAATGTTTTAAGTTTTTTAGAAGATGA
TAAATCTAAGAAATTACTTAACATTTTAGAAAAGATTTGTGATGAGAAGAAATTGAAAATTATATTATCTTTGATTAAAG
AAGATGAGTTGTGTGTTTGTGATATTTCTTTGATATTGAAAATGAGTGTTGCTTCAACTTCACATCATTTAAGACTTTTA
TATAAAAATGATGTACTTGATTTTTATAAAAAGGGAAAGATGGCATATTATTTTATTAAAGACGATGAAATAAGAGAATT
TTTCTCTAAAAATCAGGAGGGTTTTTGA

Protein sequence : 
MSYENACDVICVHEDKVNNVLSFLEDDKSKKLLNILEKICDEKKLKIILSLIKEDELCVCDISLILKMSVASTSHHLRLL
YKNDVLDFYKKGKMAYYFIKDDEIREFFSKNQEGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadC YP_189777.1 CadC family transcriptional regulator Not tested vSe1 Protein 9e-35 94
cadX YP_254239.1 cadmium efflux system accessory protein CadX Not tested ¥ðSh1 Protein 3e-32 85
cadX YP_252015.1 hypothetical protein Not tested SCCmec Protein 7e-23 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TEH_23670 YP_004887858.1 cadmium resistance regulatory protein BAC0059 Protein 6e-14 43
TEH_23670 YP_004887858.1 cadmium resistance regulatory protein BAC0056 Protein 4e-12 41