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Name : TEH_23560 (TEH_23560) Accession : YP_004887847.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Unknown Product : putative DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2351406 - 2353187 bp Length : 1782 bp Strand : - Note : - DNA sequence : ATGAGTACGGTTATTTTAGCTGAAAAACCAAGCCAGGCATTAGCCTACGCAAGTGCTTTAAAACAAAGCACCAAAAAAGA CGGTTATTTTGAGATCAAAGACCCACTATTTACAGATGAAACGTTTATCACTTTTGGTTTTGGGCATTTAGTCGAATTAG CAGAACCAGGTCATTATGACGAAAAGTGGCAAAATTGGAAACTTGAATCTTTGCCGATTTTACCTGATCGATACGATTTT GAAGTCGCAAAAGATAAGGGAAAGCAGTTTAAAATTGTTGCAGAACTTCTCAAAAAGGCAAATACAATTATTGTTGCAAC AGATAGCGACAGAGAAGGTGAAAATATCGCCTGGTCGATTATCCATAAAGCAAATGCCTTTTCAAAAGATAAAACATTTA AAAGACTATGGATCAATAGCTTAGAAAAAGATGTGATCCGAAGCGGTTTTCAAAATTTGCAACCAGGAATGAATTACTAT CCCTTTTATCAAGAAGCGCAAACACGCCAAATTGCCGATTGGTTGATTGGCATGAACGCAAGCCCTTTGTATACGTTAAA TTTACAACAGAAGGGCGTACAAGATACATTTTCACTAGGACGTGTTCAAACGCCCACCTTATACCTTATTTTTCAGCGCC AGGAAGCCACAGAGAATTTTAAAAAAGAACCTTTTTTCGAGGTGGAAGCTAGTATAAAAGTAAACCAAGGGTCATTTAAG GGCGTTCTAAGCCCCACACAGCATTTTAAAACCCAAGAGGAGCTTTTAGCTTTTGTTTCTTCTAAACAAGCTAAAATAGG CAATCAAGAGGGGATAATTGCTGATGTTCGAACCAAAGAGAAGAAAACGAATAGTCCGAGTTTGTTTTCTTTAAGTAGTT TGCAATCAAAAGTCAATCAGCTTTATAAAGCGACAGCGAGCCAAACTTTAAAAGCTATGCAAGGACTGTATGAAGCAAAA TTATTGAGTTATCCAAGAACAGATACACCATTTATTACAGAGAACGAATTTGCTTATTTAAAAGCGAATTTTGGCAAATA TAGCGGTTTTTTAGGACTTGATCTTGAAATGGTTCAAACAGAGCCTAGAAAGCGTTATGTGGACGGTAGTAAGGTACAGG AACACCACGCCATTATTCCAACAAAACAAGTACCTAACGAATCTGCATTAGCAAAAATGGACGATTTACAACGAAAAATA TATGCTTTAGTCGTTAAAACGACCGTTGCCATGTTTTTACCTGATTACTTGTATGAAGAAACCAAGATACAAACGAAAGT AGCTGATTTGCTGTTTCAATCGATCGGAAAGACACCAAAACAAGAAGGTTGGAAAATTCTTTTCAAACAACAAACCAAAG AAGAAAAAGAGGACGTTCAAACGTTACCACTCGTTATCATTGGCGAACGTGCCGAAGTTGATGTTAAGAGTGTTGAAAAA GAAACGCAACCGCCAAAAGCTTTTACAGAAGGTACACTTTTAACCGCTATGAAAACGGCGAATAAAACGGTTGATAATGA AGAAGCAATAAAAATTTTACAAGAAGTTGAGGGGATTGGAACAGAAGCAACAAGAGCAAGTATTATTGAAGCGTTAAAAC AAAAAGAATATATCCAAGTGATTAAGAATAAACTTGTTGTAACTGAAAAAGGAAAATTATTGTGCCAGGCAGTTGAAAGT CAGCACCTTTTAACGAGTGCTGAAATGACGGCTAAATGGGAAATCATAGAAAGTGAGCAGGTAATCGTTCGAAAGGATCG ATTACCTGCTCACTTTCTATGA Protein sequence : MSTVILAEKPSQALAYASALKQSTKKDGYFEIKDPLFTDETFITFGFGHLVELAEPGHYDEKWQNWKLESLPILPDRYDF EVAKDKGKQFKIVAELLKKANTIIVATDSDREGENIAWSIIHKANAFSKDKTFKRLWINSLEKDVIRSGFQNLQPGMNYY PFYQEAQTRQIADWLIGMNASPLYTLNLQQKGVQDTFSLGRVQTPTLYLIFQRQEATENFKKEPFFEVEASIKVNQGSFK GVLSPTQHFKTQEELLAFVSSKQAKIGNQEGIIADVRTKEKKTNSPSLFSLSSLQSKVNQLYKATASQTLKAMQGLYEAK LLSYPRTDTPFITENEFAYLKANFGKYSGFLGLDLEMVQTEPRKRYVDGSKVQEHHAIIPTKQVPNESALAKMDDLQRKI YALVVKTTVAMFLPDYLYEETKIQTKVADLLFQSIGKTPKQEGWKILFKQQTKEEKEDVQTLPLVIIGERAEVDVKSVEK ETQPPKAFTEGTLLTAMKTANKTVDNEEAIKILQEVEGIGTEATRASIIEALKQKEYIQVIKNKLVVTEKGKLLCQAVES QHLLTSAEMTAKWEIIESEQVIVRKDRLPAHFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE1482 | NP_765037.1 | DNA topoisomerase III topB | Not tested | vSe2 | Protein | 3e-99 | 41 |
