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Name : pdp (TEH_23020) Accession : YP_004887793.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2306225 - 2307526 bp Length : 1302 bp Strand : - Note : The N-terminus of this ORF was identified by Edman sequencing. DNA sequence : ATGCGCATGGTTGATTTAATTGAAAAAAAGCGGGATGGGTACGCTTTAACCAAAGAGGAAATTGAATTTATAATTCAAGA ATACACAAAAGATAAGATTCCTGACTATCAGATGAGTGCTTTTCTTATGACTGTCTTTTATGAGGATATGACTGATGAAG AAATTACAGCTTTAACTTTAGCAATGGCTGATTCAGGAGAAAAGATCGATTTATCTTCGATTGAGGGGATTAAAGTTGAT AAACATTCAACTGGAGGCGTTGGAGACACAACGACTTTAGTTTTAGCTCCTCTAGTGGCAAGCGTAGGTGTGCCAGTTGC TAAAATGTCTGGTCGTGGTTTGGGCTATACTGGAGGAACGTTGGATAAATTGGAATCTATACCAGGGTTTAAAATCGAAC TTTCTGACCGTGCGTTTATTGACGAAGTAAATAAAAACAAGGTAGCAGTGATCGGCCAAAGTGGTGACTTAGCTCCAGCA GATAAAAAACTATATTCCTTACGTGATGTGACGGCGACAGTTGATTCAATTCCTTTAATTGCAAGTTCGATTATGAGTAA GAAAATCGCTGCAGGTGCAGATGCGATCGTTTTGGACGTTACAACAGGTGAGGGTGCATTTATGAAAAACCTTGAAGATG CAAGACGATTGTCTCATACAATGGTTCGTATCGGCGAACTTGCTAAGCGGAAAACGATGGCGGTCATTTCTGATATGAGT CAACCTTTAGGAAAGGCGATCGGAAATGGTTTAGAGGTTGTAGAAGCCATCGAAACCCTGCAAGGAGAAGGCCCTAATGA TTTATTAGAGATGTGTTATGTGCTTGGTAGCCAAATGTTAGTCTTAGGTGAAAAAGCAGAAACTTTAGAAGAAGCTCGAA GCCTGTTAGAAGAAGCTGTTTCTTCCGGAGCAGCGTTTGAAACTTTTAAAAATATGATCAAAAATCAAGGCGGTGACGAA TCTATATGTAGCCAACCTGAGAAATTATTAACAGCGCCTTTTAAAATCGAGTTACCTGCTAAAAAAGCGGGTGTTGTTAC ACAACTTGTAGCCAATGAAATTGGTATTGCTGCCATGATGTTAGGCGCAGGTCGTCAAACCAAAGAAGAAACGATCGATT ATGGTGTAGGATTAAAGTTACATAAAAAAGTTGGCGAACAAGTAGAAAAAGGAGAATCCTTAGTGACAATTTATAGCAAT ACTGAACAAATTGAACCAATCAAAGAGAAATTATATCAAAATATTCAGATCGGAGAAGCTGCTGATAAACCAATATTAGT CCATGAAATCATTACAGAGTAG Protein sequence : MRMVDLIEKKRDGYALTKEEIEFIIQEYTKDKIPDYQMSAFLMTVFYEDMTDEEITALTLAMADSGEKIDLSSIEGIKVD KHSTGGVGDTTTLVLAPLVASVGVPVAKMSGRGLGYTGGTLDKLESIPGFKIELSDRAFIDEVNKNKVAVIGQSGDLAPA DKKLYSLRDVTATVDSIPLIASSIMSKKIAAGADAIVLDVTTGEGAFMKNLEDARRLSHTMVRIGELAKRKTMAVISDMS QPLGKAIGNGLEVVEAIETLQGEGPNDLLEMCYVLGSQMLVLGEKAETLEEARSLLEEAVSSGAAFETFKNMIKNQGGDE SICSQPEKLLTAPFKIELPAKKAGVVTQLVANEIGIAAMMLGAGRQTKEETIDYGVGLKLHKKVGEQVEKGESLVTIYSN TEQIEPIKEKLYQNIQIGEAADKPILVHEIITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-75 | 44 |
