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Name : clpE (TEH_19520) Accession : YP_004887443.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1949407 - 1951650 bp Length : 2244 bp Strand : + Note : - DNA sequence : ATGCTTTGTCAAAACTGTGGAAAAAATGAAGCAACCATTCATTTATATGCAAATGTAGGTGGACAAAGACGACAAATCGA CTTTTGTCAAAATTGTTATCAAAAATTAAAAAATCAACAAGAAAACCCAATGGGGGGCATGCAAGGTATGCAACAAGATC CATTTGGCTTTGGGAATTTAGATGATTTCTTCCGTCAAATGTCGCAAATGCAAGGTGGTAATTCCTATTACTCACAAACG CCTCCAACACAAGCTGGTGGCGGAAATAACGGAAATGGTGGTCAATCCTCAAACAATTCCGGTCTATCTGGTCTTTTAGG TGAATATGGCATTAATATCACCCAACAAGCCAAAGATGGCCAAATCGACCCCGTTGTAGGACGTGATGATGAAATTAAAC GTGTCATCGAAATTTTAAATCGTCGTACAAAAAATAATCCAGTTTTAATTGGCGAAGCTGGTGTTGGTAAAACAGCTGTC GTTGAAGGTTTGGCACAAAAAATCGTCGATGGCGATGTACCTCAAAAATTGATGGACAAACAAGTGGTACGACTTGATGT AGCTTCACTTGTACAAGGAACTGGTATCCGTGGTCAATTTGAAGAAAGAATGCAACAGTTGATCAGCGAAATCAGAGAAG CAGAAAATATCATCCTGTTTATCGATGAAGTCCATGAAATTGTAGGTGCTGGTACAGCTGGCGACGGTAGCATGGATGCT GGCAATATCTTAAAACCAGCATTAGCCCGCGGCGATTTGCAAATGGTAGGCGCAACAACTTTAAATGAGTTCCGCACCAT TGAAAAAGACGCTGCTTTAGAACGTCGTTTGCAATCAGTACGCGTAGATGAACCAACAATCGAAGAGACAGTTTCGATTT TAAAAGGTTTACAACCACGCTATGAAGATTATCATCATGTAAAATATACCGACGAGGCGATTCAAGCAGCAGCTGATTTA TCAAATCGTTACATTCAAGATCGTTTCCTACCTGACAAGGCAATCGACTTGTTGGATGAATCAGGTTCTAAAGAAAACTT GACCATTCAATACGTTGATCCAAAGACGATCGATAAAAAATTAGAAGATGCGCAACAAGAAAAAAGCCAAGCTTCTAAAG AAGAAGATTACGAAAAAGCTGCTTACTACAGAGACCAAATCAATAAACTTGAAAAAATGAAAGAAAAACAAGTCAATGAT GAACAAATGCCTGTAATCACTGAAAAAACAATGGAACAAATTGTCGAACAACAAACAGGTATTCCTGTAGGTGAATTAAA AGAAAAAGAACAAAATCAATTACGTAGCTTAAGTGACGACTTGAAAAAACAAGTTATTGGTCAAAACGAAGCAATCGATA AAGTTTCTAAAGCTATTCGACGTAATCGAGTAGGATTAGGAAAACAAAATCGTCCAATTGGTTCTTTCTTATTTGTAGGA CCTACGGGTGTTGGTAAGACAGAACTTGCTAGACAGTTGTCTTATGAACTATTCGGTTCTATTGATTCGATGATTCGCTT TGATATGTCTGAATATATGGAAAAACACAGTATATCCAAGCTAATCGGTTCACCGCCAGGCTATGTTGGTTATGAAGAAG CAGGTCAATTGACCGAAAAAGTTCGTCGTAACCCATACAGCTTGATCTTATTAGATGAAGTGGAAAAAGCACATCCTGAT GTATTGCATATGTTCTTGCAAATACTTGAAGATGGACGCTTAACTGATGCTCAAGGACGTACCGTAAGCTTTAAAGATAC ACTCATTATCATGACAAGTAACGCTGGTACTGGTAATGTTGAAGCCAATGTTGGTTTCGGCCCTGCCCGTGAAGGTGTAA CAAATTCAGTAATGAGTCATCTAAAAGACTTCTTTAACCCTGAATTCTTAAACCGTTTTGACGGTATTGTAGAATTTAAG GAATTAAGCAAAGAAAACTTGATGAAAATCGTTTCTTTGATGCTTGATGATGTCAACAATATGCTTTCTTATCAAAAAAT TCATATTGATGTTTCTCAAGATGTAAAAGAAAAACTGGTTGAATTAGGATACGATCCAGCAATGGGTGCACGTCCACTAC GTCGCACAATTCAAGAACAAATTGAAGATGGCATCGCTGAATACTACCTCGATAATCCAGGAAGTTCAGAACTTAAGGCA GTTCTTGACGATAATGGACAAATCAAGATTGAAGCGGCAGAAAGTGCCTATGTAGAAAATAAACAAGAAGATGAAAATAA ATAA Protein sequence : MLCQNCGKNEATIHLYANVGGQRRQIDFCQNCYQKLKNQQENPMGGMQGMQQDPFGFGNLDDFFRQMSQMQGGNSYYSQT PPTQAGGGNNGNGGQSSNNSGLSGLLGEYGINITQQAKDGQIDPVVGRDDEIKRVIEILNRRTKNNPVLIGEAGVGKTAV VEGLAQKIVDGDVPQKLMDKQVVRLDVASLVQGTGIRGQFEERMQQLISEIREAENIILFIDEVHEIVGAGTAGDGSMDA GNILKPALARGDLQMVGATTLNEFRTIEKDAALERRLQSVRVDEPTIEETVSILKGLQPRYEDYHHVKYTDEAIQAAADL SNRYIQDRFLPDKAIDLLDESGSKENLTIQYVDPKTIDKKLEDAQQEKSQASKEEDYEKAAYYRDQINKLEKMKEKQVND EQMPVITEKTMEQIVEQQTGIPVGELKEKEQNQLRSLSDDLKKQVIGQNEAIDKVSKAIRRNRVGLGKQNRPIGSFLFVG PTGVGKTELARQLSYELFGSIDSMIRFDMSEYMEKHSISKLIGSPPGYVGYEEAGQLTEKVRRNPYSLILLDEVEKAHPD VLHMFLQILEDGRLTDAQGRTVSFKDTLIIMTSNAGTGNVEANVGFGPAREGVTNSVMSHLKDFFNPEFLNRFDGIVEFK ELSKENLMKIVSLMLDDVNNMLSYQKIHIDVSQDVKEKLVELGYDPAMGARPLRRTIQEQIEDGIAEYYLDNPGSSELKA VLDDNGQIKIEAAESAYVENKQEDENK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-151 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_004887443.1 | ATP-dependent Clp protease ATP-binding subunit ClpE | VFG0080 | Protein | 0.0 | 61 |
| clpE | YP_004887443.1 | ATP-dependent Clp protease ATP-binding subunit ClpE | VFG0079 | Protein | 6e-157 | 53 |
