Gene Information

Name : ssb (TEH_18320)
Accession : YP_004887323.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1850968 - 1851438 bp
Length : 471 bp
Strand : -
Note : The N-terminus of this ORF was identified by Edman sequencing.; protein synonym:helix-destabilizing protein

DNA sequence :
ATGATTAACAATGTAGTTTTAGTAGGAAGATTAACTAAGGATCCTGACTTAAGATACACACAAAGTGGTACAGCAGTAGC
AAACTTTACGTTAGCTGTTAACCGCACATTTACAAATCAAGATGGCGAAAGAGAAGCAGACTTTATTAATTGCGTGATTT
GGCGTAAAGCAGCAGAAAACTTGGCAAATATGGTTGGTAAGGGTGCACAAATTGGTGTGACTGGAAGAATCCAAACAAGA
AACTACGAGAACAAAGAAGGACAACGTGTGTTTGTCGTAGAAGTTGTAGCAGAAAACTTTCAAATGCTAGAAAGCAGGAA
TAAGCAAAATGGCCAAAATAATGCAAACACAGGTGCTTCAAATAATAACGCGAACGAACATTCGCGAAATCAACAAAACA
GCACACAAAGCAATACTGATCCGTTTGGTGGAAGTTCAATTGACGTAACGGATGATTCTCTGCCTTTCTAA

Protein sequence :
MINNVVLVGRLTKDPDLRYTQSGTAVANFTLAVNRTFTNQDGEREADFINCVIWRKAAENLANMVGKGAQIGVTGRIQTR
NYENKEGQRVFVVEVVAENFQMLESRNKQNGQNNANTGASNNNANEHSRNQQNSTQSNTDPFGGSSIDVTDDSLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-38 61
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 8e-39 61
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-30 56
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 8e-32 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-31 50
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-31 50
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-31 50
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-31 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-31 50