Gene Information

Name : TEH_17290 (TEH_17290)
Accession : YP_004887220.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1765173 - 1765871 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAATTTTAGTTGTGGATGATGAACCTTCTATTGTTACTCTATTGACTTTTAACCTAGAAAAAGCAGGATATCA
AGTCACCAGTGCTGAAGATGGCAAGAAAGCTTATGAATTAGCAACGAATCAAACGTTCGATTTTATTATTTTAGATATCA
TGCTTCCTTTTATCGACGGTATCGATTTGACGCAAAAATTAAGACAAGAAAAAATTGATACCCCTATTTTAATTTTAACG
GCAAAAGATGAATCAATTGATCGAATTTTAGGTCTAGAAATTGGCGCAGATGATTATTTAACCAAGCCTTTTAGCCCTAG
AGAAGTTATAGCACGCATCAAAGCAATCTCTCGTCGACTAGAAGTACGACAAACAACAAGTAATGACGAAGGACCTTCCG
AGATTTTACGAGCCGGAAATATTGTTTGTAACATGGATGATTATCGAGTAACGGTAAGTGAGGAAACCATCGAATTAACG
CCCAAAGAATTTGAACTGCTTGTATACTTTATGAAAAGAAAGGGACGTGTCATTTCTCGTGATATGCTACTTGATTGTAT
TTGGCATTTTGATTTTGATGGTCAAAATCGAATTGTTGATGTTCATATCGGTCATTTAAGAGAAAAAATTGAAAAAGATC
CTAAACAACCTAAGCACATTCAGACTGTCCGAGGTTTTGGCTATAAGTTTTCGGAGTAA

Protein sequence :
MKKILVVDDEPSIVTLLTFNLEKAGYQVTSAEDGKKAYELATNQTFDFIILDIMLPFIDGIDLTQKLRQEKIDTPILILT
AKDESIDRILGLEIGADDYLTKPFSPREVIARIKAISRRLEVRQTTSNDEGPSEILRAGNIVCNMDDYRVTVSEETIELT
PKEFELLVYFMKRKGRVISRDMLLDCIWHFDFDGQNRIVDVHIGHLREKIEKDPKQPKHIQTVRGFGYKFSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-42 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TEH_17290 YP_004887220.1 OmpR family two-component response regulator AE016830.1.gene1681. Protein 2e-76 67
TEH_17290 YP_004887220.1 OmpR family two-component response regulator HE999704.1.gene2815. Protein 3e-65 57
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_002952.2859905.p0 Protein 3e-55 55
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_007622.3794472.p0 Protein 3e-55 55
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_002758.1121668.p0 Protein 4e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_009641.5332272.p0 Protein 4e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_013450.8614421.p0 Protein 4e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_007793.3914279.p0 Protein 4e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_002745.1124361.p0 Protein 4e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_009782.5559369.p0 Protein 4e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_002951.3237708.p0 Protein 4e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_003923.1003749.p0 Protein 3e-55 54
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_012469.1.7686381. Protein 7e-54 47
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_012469.1.7685629. Protein 2e-42 44
TEH_17290 YP_004887220.1 OmpR family two-component response regulator BAC0125 Protein 3e-33 42
TEH_17290 YP_004887220.1 OmpR family two-component response regulator AM180355.1.gene1830. Protein 1e-32 42
TEH_17290 YP_004887220.1 OmpR family two-component response regulator HE999704.1.gene1202. Protein 7e-38 41
TEH_17290 YP_004887220.1 OmpR family two-component response regulator CP000675.2.gene1535. Protein 5e-37 41
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_014475.1.orf0.gen Protein 3e-32 41
TEH_17290 YP_004887220.1 OmpR family two-component response regulator NC_005054.2598277.p0 Protein 3e-32 41
TEH_17290 YP_004887220.1 OmpR family two-component response regulator AF130997.1.orf0.gene Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TEH_17290 YP_004887220.1 OmpR family two-component response regulator VFG1563 Protein 1e-42 43
TEH_17290 YP_004887220.1 OmpR family two-component response regulator VFG1702 Protein 2e-42 43