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Name : copB (TEH_16480) Accession : YP_004887139.1 Strain : Tetragenococcus halophilus NBRC 12172 Genome accession: NC_016052 Putative virulence/resistance : Resistance Product : copper-transporting ATPase CopB Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.6.3.4 Position : 1678544 - 1680583 bp Length : 2040 bp Strand : + Note : protein synonym:CPx-type ATPase DNA sequence : ATGAGTGAAAATCATGAACATATGGATCACGCAGCAATGGAACACAACCATGAACATGGCGGACATTCTGGAATGGATCA TTCCATGCATATGGGAAATTTAAAACCAAAATTTTTTATTTCATTAATTTTAACTATCCCAATTATTTTAATGTCGCCGA TGATGGGTTTGGATTTACCTTTTCAATTTCAATTTCCAGGTTCTGAATGGCTCGTATTGATCTTAGCTACAATCTTGTTC TTTTATGGCGGAATGCCATTCTTACAAGGTGCAAAAATGGAACTATCCTCAAAACAACCAGCAATGATGACATTAATTTC TTTAGGGATTACAGTAGCGTATATTTACAGTTTATATGCTTTCATTGCCAATAACTTTATCCCTCAAATTGACCATGTGA CAGATTTCTTTTGGGAATTAGCTACATTGATCGTTATTATGTTACTAGGTCATTGGGTTGAAATGAATGCAGTAAGTAAT GCTGGAAACGCCCTAGAAGAAATGGCGCAATTATTACCAAATACTGCGCATGTTGTCGATAAAAATGGAGATACAAAAGA TGTTTCTTTGCAAGATGTACAAGAAGGTCAACATGTATTAATCAAAGCAGGTGAAAAAATTCCAACTGATGGTACAGTAT TAAAGGGAACAACCAGTGTTAACGAAGCGATGGTTACTGGTGAAGCTAAAGATGTAGAAAAAGAACAAAAAGATACTGTT ATCGGTGGTTCTGTTAACGGATCGGGTACTATTACAGTTGAAGTCACCGGAACTGGTGAATCAGGTTATCTTTCTCAAGT TATGACTCTTGTTGAAAATGCACAAAATGAAAAATCAAAAGTTGAAACCCTATCAGACCAAGTGGCTAAATGGTTATTCT ATGTTGCTCTAGCAGCTGGTATTCTCGCTTTTATCGGTTGGTTAATCACAGCAGATTTGAGCACAGCTTTTGAACGTATG GTAACAGTGCTTATTATTGCTTGTCCGCACGCATTAGGGCTTGCAATTCCGCTAGTGATTGCCCGTTCAACTTCGCTAGG TGCTAAAAATGGTTTGCTATTACAAAATCGCGAAGCATTAGAAACAGCTAAAAAAGTTGATGTCATTTTAATGGATAAAA CAGGTACCTTGACAGAAGGGAACTTTGCGGTAAATGACTATCGTTCATTTAGTGAGGATTATACAGCAGATCAAGTACTC ACTTATATTTCAGCTCTAGAACAAAATTCTAATCACCCACTAGCCGTCGGAATTTTAAATAAAGCCGAAGAATTATCTTT AGATATTCCAAAAGCTTCTGATGTTGATAATTTACCGGGCGTTGGTTTAGAAGGAACTGTTAACGGAAAAGATATTAAAG TCGCTAGTGTTTCTTATTTGAATAAACAATCGATTGACTACGATCAAGATAATTTTGATGAATTATCAAGACAAGGAAAT TCGGTTAGTTTCCTATTAATTGATGAGAAAAATATTGGATTAGTCGCTCAAGGGGATCAAATCAAATCTACTGCTAAATC CATGATACAATCACTAAAAGATCAAAATATTGAACCTGTGATGTTAACAGGAGATAATCAACAAGTAGCACAAGCTGTCG CTAAAGAATTAGGTATTGATGATGTGCACGCTGAATTAATGCCGGAAGACAAAGAAACAATGGTCAAAGATTATCGTGAT AATGGCCAAACTGTAATGATGGTCGGTGACGGCGTCAATGATGCGCCTAGCTTGGCCAGAGCAGATGTCGGTATAGCCAT TGGTGCTGGTACAGATGTTGCTATCGACTCAGCTGATGTCATATTGGTCAAAAGCGATCCATCCGATATCATGCATTTCT TAACATTAGCTAAACGTACGCAACGTAAGATGGTACAAAATATCTGGTGGGGCGCTGGCTACAACATTGTAGCTATTCCA TTGGCAGCTGGTGTTCTTGCACCTATCGGTATTATCTTAAGCCCTGCAGTTGGCGCGATCGTGATGTCATTAAGTACAGT TATTGTTGCTATTAACGCAATGTTACTGAAAATTGATTAA Protein sequence : MSENHEHMDHAAMEHNHEHGGHSGMDHSMHMGNLKPKFFISLILTIPIILMSPMMGLDLPFQFQFPGSEWLVLILATILF FYGGMPFLQGAKMELSSKQPAMMTLISLGITVAYIYSLYAFIANNFIPQIDHVTDFFWELATLIVIMLLGHWVEMNAVSN AGNALEEMAQLLPNTAHVVDKNGDTKDVSLQDVQEGQHVLIKAGEKIPTDGTVLKGTTSVNEAMVTGEAKDVEKEQKDTV IGGSVNGSGTITVEVTGTGESGYLSQVMTLVENAQNEKSKVETLSDQVAKWLFYVALAAGILAFIGWLITADLSTAFERM VTVLIIACPHALGLAIPLVIARSTSLGAKNGLLLQNREALETAKKVDVILMDKTGTLTEGNFAVNDYRSFSEDYTADQVL TYISALEQNSNHPLAVGILNKAEELSLDIPKASDVDNLPGVGLEGTVNGKDIKVASVSYLNKQSIDYDQDNFDELSRQGN SVSFLLIDEKNIGLVAQGDQIKSTAKSMIQSLKDQNIEPVMLTGDNQQVAQAVAKELGIDDVHAELMPEDKETMVKDYRD NGQTVMMVGDGVNDAPSLARADVGIAIGAGTDVAIDSADVILVKSDPSDIMHFLTLAKRTQRKMVQNIWWGAGYNIVAIP LAAGVLAPIGIILSPAVGAIVMSLSTVIVAINAMLLKID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 4e-148 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_004887139.1 | copper-transporting ATPase CopB | BAC0079 | Protein | 0.0 | 62 |
| copB | YP_004887139.1 | copper-transporting ATPase CopB | BAC0383 | Protein | 2e-148 | 50 |
| copB | YP_004887139.1 | copper-transporting ATPase CopB | BAC0629 | Protein | 4e-135 | 48 |
