Gene Information

Name : xerC (TEH_15670)
Accession : YP_004887058.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1589016 - 1589912 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGACAAAAGATTGGCCAAAGGAATATTACCGTTATCTCACGGTTGAGCGCGGTTATTCTGAAAAAACAAAAGAGGCTTA
TAAAGAAGATATTGATAATTTTTTTGTCTTTTTAAAAGACTCTGGAGATGCTAATTATTTGCAGATTGATCATCGCGATG
TACGCGTTTATTTAAGTGAATTAAATGAACAAAGTTATAGTCGTAACACCGTTAGTCGCAAAATTGCCAGCTTGCGTTCT
TTTTATCATTTTTTATTAAAACATGAAGTGATAGAAGAAAATCCCTTTTCTTATGTTCATTTGAAAAAAAAGAATGTCAA
ATTACCTCGCTTTTTTTATGAAAAAGAGATTGCAGTGTTATTTGATAGTGTTCAAGGAAACAAACCTTTGCAACAAAGAG
ATCGCGCTTTATTAGAGGTCTTATATGGTTCTGGTTTGCGAGTGAGTGAGTGTGCTTCATTGACGCTTGAGCAAATTGAT
TGGGAAAACAGTGTATTGTTTATCCATGGAAAAGGAAACAAGGATCGTTATGTGCCCTTTGGCGCTTACGCACAAGAAGC
CTTAGATGTATATCTATCTGAAGGACGTTCTTTTTTGATGGAAAAATACCATAAAGATCATGCATATGTTTTTGTTAACC
GTTTAGGTGATGGTATCACTTCAACGGGTATTGAGTATGCCTTAAATCAGGTAATCAAAAAAAGTAGCTTGGACTCACAA
ATTCACCCGCATATGTTACGACATACTTTTGCTACTCATTTATTAAATAATGGGGCGGATTTGCGGACGGTTCAAGAGCT
ATTAGGGCATGCTAATTTATCAACAACACAAATTTATACGCATGTAACTAAAGAAAACTTACAAAGAAATTATCGTCAGT
TTCATCCAAGAGCATGA

Protein sequence :
MTKDWPKEYYRYLTVERGYSEKTKEAYKEDIDNFFVFLKDSGDANYLQIDHRDVRVYLSELNEQSYSRNTVSRKIASLRS
FYHFLLKHEVIEENPFSYVHLKKKNVKLPRFFYEKEIAVLFDSVQGNKPLQQRDRALLEVLYGSGLRVSECASLTLEQID
WENSVLFIHGKGNKDRYVPFGAYAQEALDVYLSEGRSFLMEKYHKDHAYVFVNRLGDGITSTGIEYALNQVIKKSSLDSQ
IHPHMLRHTFATHLLNNGADLRTVQELLGHANLSTTQIYTHVTKENLQRNYRQFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-39 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-39 41