Gene Information

Name : TEH_14160 (TEH_14160)
Accession : YP_004886907.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 1423411 - 1424919 bp
Length : 1509 bp
Strand : -
Note : fragment

DNA sequence :
GTGATCCCTGAACGTCGTATGCATGCCAAAGGATCAGGTGCATTTGGAACATTTACAGTGACACATGATATTACTAAGTA
TACTAAAGCTAAAATATTTTCTGAAATAGGGAAACAAACGGAAATGTTTGCTCGTTTTTCTACAGTTGCTGGAGAACGTG
GCGCGGCGGACGCGGAACGAGATATTCGTGGCTTTGCATTAAAATTTTATACAGAAGAGGGAAATTGGAACTTAGTTGGA
AATAATACCCCCGTGTTTTTCCACCGAGATCCAAAGCATTTTATTGATTTGAACCGTGCGATCAAAAGAGATCCAAGAAC
GAATATGAGAAGCCCTAACAATAATTGGGATTTCTGGACATCACTGCCAGAGTCATTACACCAAGTAACCATTACCATGA
GTGATCGTGGCATTCCATCTTCTTATCGTTTTATGCACGGGTTTAGTTCCCATGCCTACAGTTTAATCAATGCGGATAAC
GAACGTGTGTGGGTAAAATTTTATTTCCGTTCACAACAAGGAATCCAAAACTTAACCGATCAGGAAGCAGACATTGTTAA
TGCCAATACTCGTGAATCCCATCAAGCAGATTTATACAATGCTATCGAACAAGGAAAGTATCCTAAGTGGAAAATGTATA
TCCAAGTGATGACACAAGAAGAAGCGAATCATTTAGACTATAATCCTTTTGATTTAACAAAAGTTTGGTACAAGGAAGAT
TTTCCTTTAATGGAAGTAGGGGAATTTGAATTAAATAAAAATCCAGAGAATTACTTCCAGGATGTGGAAGAAGCAGCGTT
CAACCCGGCAGAACAAGTGCCAGGAATCGGTATCTCACCGGATCGTATGCTACAAGCACGTGTTTTTGCCTACCAAGACG
CAGCACGTTATCGCCTTGGTGTAAATCACCATCAGATTCCTGTTAACGCGCCTCGTGGCGTGAAAAACCCTCATTCCTAT
AGTCGCGATGGACAAGGAAGGATGGACGGAAACCTTGGCAGTGAAGTTCATTATACCCCTAATAGTTACGGAAATTATAC
AGATCATAAATTTATGGAAGAACCAGCAATGCAAGGTGGAGATGTAAAAAATTATGACTTTAGAGAAGATGATCATGATT
ATTATACCCAGCCTGGCATGCTTTTCCGCCGTATGACAGAGGAACAACAACTTGTATTATTTGAAAACACGGCTCGTAAT
ATGGGAGATAGTACTTTACAAATCAAGCACCGTCATATCAATAATTGTTATCAAGCAGATCCAGATTATGGCGCAGGTGT
GGCTAAAGCATTGGGAATCGATTTAAATGACGTTGATTTAACACCGACACCTCGTGATTCAGAAGAAGCGAATGATAAAG
CAAATGCTAGAGGTCACAAAGATTTGAATGTACCCACAGAGCCTGCTATGCCGGAAACTGCAAAAGATTTAGGACCTGAA
GGACGCGATACTAACGTAGAAGATCCTTTCTATCTAGTGGATCCTATGAATGATCCATTCTTATTATAA

Protein sequence :
MIPERRMHAKGSGAFGTFTVTHDITKYTKAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWNLVG
NNTPVFFHRDPKHFIDLNRAIKRDPRTNMRSPNNNWDFWTSLPESLHQVTITMSDRGIPSSYRFMHGFSSHAYSLINADN
ERVWVKFYFRSQQGIQNLTDQEADIVNANTRESHQADLYNAIEQGKYPKWKMYIQVMTQEEANHLDYNPFDLTKVWYKED
FPLMEVGEFELNKNPENYFQDVEEAAFNPAEQVPGIGISPDRMLQARVFAYQDAARYRLGVNHHQIPVNAPRGVKNPHSY
SRDGQGRMDGNLGSEVHYTPNSYGNYTDHKFMEEPAMQGGDVKNYDFREDDHDYYTQPGMLFRRMTEEQQLVLFENTARN
MGDSTLQIKHRHINNCYQADPDYGAGVAKALGIDLNDVDLTPTPRDSEEANDKANARGHKDLNVPTEPAMPETAKDLGPE
GRDTNVEDPFYLVDPMNDPFLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-125 61
katA YP_005126717.1 catalase Not tested Not named Protein 1e-79 43
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 9e-78 41
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 9e-78 41
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 9e-78 41
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 9e-78 41