Gene Information

Name : TEH_12400 (TEH_12400)
Accession : YP_004886731.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : peptidase M20 family protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0624
EC number : -
Position : 1233820 - 1235037 bp
Length : 1218 bp
Strand : +
Note : The N-terminus of this ORF was identified by Edman sequencing.

DNA sequence :
ATGGATAAGAAGAAAAAGATCGATTTACTTTCTGAGCTGATTCAAGTAAAGTCAGTCAATGGGGACGAAAAAGACGTAGC
TGAAATTTTAAAAAGAGAGTTAGATGACGCGGGGATTGCTAATGAAATTTTACCTTTTGGCAATAACCGAGCAAACTTAG
TTGCAACACTTGGTCATGGTCATCCTGTATTAGCTGTTTCTGGCCATATGGATGTGGTTGAAGCTGATAAAGAGAATCGG
GATACTGATCCATTTGAATTGGTCGAAAAGGACGATATGTTTTACGGCCGTGGTGTGACGGACATGAAAGCTGGTTTAGC
GGCTTTAGTTATTGCTATGATAGAATTAAAAGAAGCAGGTACTCAACTGAATGGAACAATTAAGTTACTAGCAACTGGTG
GCGAAGAAGTGGGTCAACCAGGTGCAGAAAAACTGACAGAGCAAGGCTACATGAAAGATGTTGATGCTTTATTAATTGCC
GAACCAAGTGGCTATCGTTGTGTTTACGCAAATAAAGGTGAATTAAATATCACCATCGATTCTAAAGGACAAGCAGCACA
CAGCTCCATGCCAAAAGCTGGCGTAAATGCGGTTGAACATCTACTACATGTATTAAATACAATTGAAAATAAAGTTAAAC
AAGCAACCGATGGTATTGAAAATGAAGTACTAGGAGATACGGTATTTAATATTGATGTCATTCATGGCGGAAATCAAATT
AATGCAATCCCAGCTTCAGCTCAGGCTCAAATTAATATGCGAACGATCCCTGAATTTACTAATGATCAACTAGAATCAAT
CTTTAAAGAAACAATTGCTGATTATAATCAAGATACCGATGCGCAAATTGATTACACAGTAACGATGAATACGATAGCTA
TTACTGGAAATAAAGACTCTTCTTTGATTCGTTTAATTCAAAAAATTGGAACACCGTATCTGCAAAATCAAGGAATGTCA
GAAGAAGAAATCAAACAAGCTAAAAAATCAGCGGAGTTAACGGGAATGAAATTTTCCGCCGATGAAATTTTAACGATGGG
TGTTTCTGGCGGAACAGACGGTTCGAAATTCTTGATCAATCAACCCAACGGATTTGATTATACGATGTTTGGTCCAGGTA
ATGATACGATGCATAAAGATAATGAAAGTCTATCTAAACCAATGTATTTTGATTATATTGAAATGTATAAACAACTATTT
AGCCAATATTTAAAATAA

Protein sequence :
MDKKKKIDLLSELIQVKSVNGDEKDVAEILKRELDDAGIANEILPFGNNRANLVATLGHGHPVLAVSGHMDVVEADKENR
DTDPFELVEKDDMFYGRGVTDMKAGLAALVIAMIELKEAGTQLNGTIKLLATGGEEVGQPGAEKLTEQGYMKDVDALLIA
EPSGYRCVYANKGELNITIDSKGQAAHSSMPKAGVNAVEHLLHVLNTIENKVKQATDGIENEVLGDTVFNIDVIHGGNQI
NAIPASAQAQINMRTIPEFTNDQLESIFKETIADYNQDTDAQIDYTVTMNTIAITGNKDSSLIRLIQKIGTPYLQNQGMS
EEEIKQAKKSAELTGMKFSADEILTMGVSGGTDGSKFLINQPNGFDYTMFGPGNDTMHKDNESLSKPMYFDYIEMYKQLF
SQYLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20637.1 - Not tested Internalin Protein 2e-65 41
dapE CAA07459.1 succinyl-diaminopimelate desuccinylase Not tested Internalin Protein 3e-65 41