Gene Information

Name : TEH_01280 (TEH_01280)
Accession : YP_004885619.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 146868 - 147866 bp
Length : 999 bp
Strand : -
Note : The N-terminus of this ORF was identified by Edman sequencing.

DNA sequence :
ATGTATAATTTACGGAACAAAAATTTTTTGACACTAAGGGAACTTTCATCAAACGATATGGAATTTTTGTTAGACTTAGC
TGAAAATTTGAAAGCAGCAAAGTATACAGGTACAGAACAACAAAAGTTAAAAGGAAAAAATATTGCTTTAATATTTGAAA
AAGATTCAACTCGCACACGTTGTTCTTTTGAAGTTGCCGCATATGATCAGGGAGCTCATGTTACATATCTTGGACCAAGT
GGTTCTCATATGGGAAAAAAAGAAACAGCTAAAGATACTGCACGTGTGCTAGGTGGCGTATACGATGGTATCGAGTATCG
TGGCTTTTCACAACGTACGGCTGAAACTTTAGCTAAATATTCTGGAGTTCCAGTATGGAATGGGCTAACTGATGAGGACC
ATCCAACACAAGTTCTTGCCGATTTTTTAACAGCCAAAGAAGCTTTAAAAAAGGATTATAACGAAATAAATTTCACTTTC
GTAGGTGATGGGCAAGATAATGTTGCGAATGCTTTAATGATTGGAGCCGCTTTAATGGGGATGAACTATCATTTAGTTTC
TCCTAAAGAATTATATCCTTCGCAAGACTTAGTAGATAATGCTTTAAAAATTGCTAAGAAAACTGGAGCAACAATTAAAA
TAACAGATGATATCGAAAAAGGAGTTAAAGATTCTGATGTTATATACGCCGATGTTTGGGTATCTATGGGAGAACCTGAT
GAAGTATGGGAAGAAAGAATTAAATTACTAAAACCATACCAAGTAAATAAGAAAATGCTAGAAATGACTAATAATCAAAA
TGTAATCTTTGAACACTGCTTGCCTTCTTTCCATAATAACGAAACAGAAGTTGGTAGGGAAATCGAAGAAAAATTTGGTT
TGAGTGAAATGGAAGTTACTGATGAAGTATTTGAAAGTAGCTCTTCGGTTGTATTTAAAGAAGCTGAAAATCGGATGCAT
ACTATCAAGGCAGTTATGGTTGCAACATTAGGTGAGTAA

Protein sequence :
MYNLRNKNFLTLRELSSNDMEFLLDLAENLKAAKYTGTEQQKLKGKNIALIFEKDSTRTRCSFEVAAYDQGAHVTYLGPS
GSHMGKKETAKDTARVLGGVYDGIEYRGFSQRTAETLAKYSGVPVWNGLTDEDHPTQVLADFLTAKEALKKDYNEINFTF
VGDGQDNVANALMIGAALMGMNYHLVSPKELYPSQDLVDNALKIAKKTGATIKITDDIEKGVKDSDVIYADVWVSMGEPD
EVWEERIKLLKPYQVNKKMLEMTNNQNVIFEHCLPSFHNNETEVGREIEEKFGLSEMEVTDEVFESSSSVVFKEAENRMH
TIKAVMVATLGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-110 76
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-110 76
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-109 76
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-109 76
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-110 76
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-110 76
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 9e-112 75