Gene Information

Name : TEH_12080 (TEH_12080)
Accession : YP_004886699.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : peptidase M20 family protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0624
EC number : -
Position : 1199799 - 1200950 bp
Length : 1152 bp
Strand : +
Note : -

DNA sequence :
ATGGACAAAGAAAAACAAATTGAAATCTTAGCAAATTTGATTGCTATAGATTCGGTGGACGATAATGAGGCGAAGGTTGC
TAACTATATCGCTTCTTTATTTGAGCCTTATAATGATCGTGAAGATGTAGATATCCAGCGAGTAACTTATGCACCGAATA
GAGACAATTTAGTTGTTACGATTGGTACTGGTGAAAAGATCTTAGGATTTTCTGGTCATGAAGATGTTGTATCTCAAGGT
GATTTGTCAGCTTGGAACAGTGACCCCTTTAAAGCTGAAATAAAAGATAATAAATTATTTGGACGCGGTGTCACTGACAT
GAAGGGTGGCTTAGCAGCCTTAGTAATTACCATGCTTGATTTTCTTGCAGAGGATGCGATTCCTGGAAAGATTAGACTGC
TTGCGACAGTTGGTGAAGAAACTGGAGAATATGGTGCAGCGCAGTTAACTAAAGCAGGCTATGCTGATGAATTGGATGGT
TTAATTATCGCAGAGCCTACCAATGAAATGAAAGAGATAGGGATATCCTCTAAAGGTGTTATTGATTACGTCGTAACATC
CATAGGTAAGGGAGCTCATAGTTCCAAACCAGAGGATGGCATAAATGCTATTGATCATTTAATTAATTTTGCTAATGAAG
TAAAACCACTAATGGAAAATTTTGATAAAACTGATCCTATTTTAGGGAAGTTAACCCATGTTCAAAGTGTCTTTCATGGT
GGTGAACAAATTAATAGCGTCCCTGTAAAAGCGATCATGAAAGGAAATATACGAACGATCCCTGCTTACCCTAATCAATT
GGTTTTCTCTGCATTGAACCATTTAATTGATAATTTAAATCAGAAACCAGACTATAACTTAAGTATTGAATATATTTTTC
CAGAAGAAGCAATGTCTGGTGATAGCAATGCAAGTCTAGTGAGGTTGATTAAAAATGTACATAAAAATATGTATCCTGAT
CCAATAAAAGTAGTCGGCCAAACAAGTGCTAGTGATGCTTCAGAATTTTCACATGCCAAAGGTGATTTTAGTATAGTGCA
AATTGGACCAGGGAATAATAGCGAGCATCAAAGTAATGAGAACATAGACATTGACGTTTTTAGTAAATCTATTGCATTTT
ATAAGAGATTTGTAGAGGCTTTTTTTGAATAA

Protein sequence :
MDKEKQIEILANLIAIDSVDDNEAKVANYIASLFEPYNDREDVDIQRVTYAPNRDNLVVTIGTGEKILGFSGHEDVVSQG
DLSAWNSDPFKAEIKDNKLFGRGVTDMKGGLAALVITMLDFLAEDAIPGKIRLLATVGEETGEYGAAQLTKAGYADELDG
LIIAEPTNEMKEIGISSKGVIDYVVTSIGKGAHSSKPEDGINAIDHLINFANEVKPLMENFDKTDPILGKLTHVQSVFHG
GEQINSVPVKAIMKGNIRTIPAYPNQLVFSALNHLIDNLNQKPDYNLSIEYIFPEEAMSGDSNASLVRLIKNVHKNMYPD
PIKVVGQTSASDASEFSHAKGDFSIVQIGPGNNSEHQSNENIDIDVFSKSIAFYKRFVEAFFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20637.1 - Not tested Internalin Protein 4e-76 45
dapE CAA07459.1 succinyl-diaminopimelate desuccinylase Not tested Internalin Protein 5e-76 45