Gene Information

Name : TEH_11970 (TEH_11970)
Accession : YP_004886688.1
Strain : Tetragenococcus halophilus NBRC 12172
Genome accession: NC_016052
Putative virulence/resistance : Unknown
Product : alpha-glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.20
Position : 1189884 - 1191545 bp
Length : 1662 bp
Strand : +
Note : -

DNA sequence :
ATGAAACAAACAAAAAAATGGTGGAAAGAAGCAGTTGCTTACCAAATTTATCCTCGTAGTTTTTATGATACAAATGGAGA
CGGAATTGGTGATATACGAGGTATTATAGAAAAATTAGACTATTTAAAAGATTTAGGGGTTGATGTAGTTTGGCTGAGCC
CAGTTTATCAATCACCTAACGATGACAATGGTTATGATATTAGCGATTATAAAGCTATTATGAGTGAATTCGGGACAATG
AAAGATCTTGATGAATTGATGGAAAAAATACACAAACGTGGTATGAAATTAATTATGGATCTTGTCATTAATCATACTTC
GGATGAACATGAATGGTTTATTGAATCACGGTCTTCTAAAGATAATCTATATCGTGATTATTACATTTGGCATCCAGGTA
AAAAAGATGGAAGCCGCCCTAATAATTGGGAATCTATTTTCAATGGTCCAGCTTGGGAGTGGGATGACAAAACAAAAGAA
TATTATATGCATATATTTTCTAAAAAACAACCTGACTTAAATTGGGAGAATCCAGAAGTGCGGCAATCGCTGTATGATAC
TGTTAATTGGTGGTTAGATAAAGGAATCGACGGTTTTAGGATTGATGCAATTACACATATCAAGAAAAAGCCTGGTTTTC
CAGATTTGCCTAATCCATTGAAAAAAGATGTTGTGCCATCTTTTGATGCGCATATGAATCAACCGGGTATTGATAAACAT
CTCACAGAATTAGCTGAAGAAACCTTCAATAACTACGATATTATGACAGTAGGAGAAGCAAATGGTGTTGAAGTAGAGGA
TGCAGAACAGTGGGTTGGTGAAGAAAACGGTTATTTTGATATGATTTTTCAATTTGAACATATAAATCTTTGGGGAGATA
AAGCTACTTTTGATCTCACAGAATTTAAAAAAGTGTTAACCAAGTGGCAAAAAGGGTTAGAAGGTGTTGGTTGGAATGCT
TTGTTTCTTGAAAACCATGACTTAGTGCGTGCGGTTTCGTCAATGGGAAATGATACAGATATGCGTAAAACATCTGCTAA
AGCGCTAGCAACGATGTATTTCTTTATGCAGGGGACTCCCTTTATTTATCAAGGGCAAGAAATTGGTATGACAAATGTTC
ATTTTGATTCTTTAGATGAATATGATGATATACAGTCAGTCAATAAAGCTAAAACTATGATTAAAGAAGGTAGTAAGCAA
GAAGAAGCAATGGAATATATTTGGGAAAGTTCTCGTGATAATTCAAGAACGCCAATGCAGTGGAATTCTACAGAGCAAGC
AGGATTTACAACGGGCACGCCATGGTTAAAAGTAAATGACAATTACGCAGATATCAACGTAGCTGAGTCTTATGAAGACC
CTAATTCTGTTTATAATTTCTATAAAAAAATGATTGATATCAGACGTCGTTCAGAAACCCTTATTTATGGAACCTATGAA
TTAATTGAAGAAAAGCACCCATCAGTTTATGCCTATCTCAGACACGGTGAGCAAGAAGATTTTCTTATTATGGTAAATAT
GTTTGATGGTCGTGAAAAAATGGACTTTTCTAAATATAATCTAAAAGAACTTGTACTAGCTAATTATGAAGTTAATGATC
GTTTAAATAATAGTATCTTATTACGTCCTTATGAAGCACGTATGTATAAAATTTCAAAATAG

Protein sequence :
MKQTKKWWKEAVAYQIYPRSFYDTNGDGIGDIRGIIEKLDYLKDLGVDVVWLSPVYQSPNDDNGYDISDYKAIMSEFGTM
KDLDELMEKIHKRGMKLIMDLVINHTSDEHEWFIESRSSKDNLYRDYYIWHPGKKDGSRPNNWESIFNGPAWEWDDKTKE
YYMHIFSKKQPDLNWENPEVRQSLYDTVNWWLDKGIDGFRIDAITHIKKKPGFPDLPNPLKKDVVPSFDAHMNQPGIDKH
LTELAEETFNNYDIMTVGEANGVEVEDAEQWVGEENGYFDMIFQFEHINLWGDKATFDLTEFKKVLTKWQKGLEGVGWNA
LFLENHDLVRAVSSMGNDTDMRKTSAKALATMYFFMQGTPFIYQGQEIGMTNVHFDSLDEYDDIQSVNKAKTMIKEGSKQ
EEAMEYIWESSRDNSRTPMQWNSTEQAGFTTGTPWLKVNDNYADINVAESYEDPNSVYNFYKKMIDIRRRSETLIYGTYE
LIEEKHPSVYAYLRHGEQEDFLIMVNMFDGREKMDFSKYNLKELVLANYEVNDRLNNSILLRPYEARMYKISK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 3e-123 48