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Name : serS (RJP_0896) Accession : YP_004885228.1 Strain : Rickettsia japonica YH Genome accession: NC_016050 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1132564 - 1133841 bp Length : 1278 bp Strand : + Note : - DNA sequence : ATGTTAAATATCAAATGGATTAGAGAAAATAAAGAATTGTTCGATGAAAAACTTAGCCAAAGATTTATTGAACCTATGTC TAGTAAAATTGCTATGCTCGACGGAGAGAAAAGAAAAATTACGAGTTTAATTCAAGAATTTCAGCATGCACGTAAGGTAA AATCAAAGATTTTAGGTAATATGGCCTCTAAAAGCGGCGAAGAGTTTGAAGGGTTACAAAGAGATGTCAAACATATAAAT GAGAAGTTGGAAGCACTTGAACAGGATCTAAATAATAATAACGAATTAAATGAACTATTAAATATGTTTCCTAATATTCC GGACGAAGAAGTACCTTACGGAATGGATGAAAGTATGAATAAATTAGTTCGTACTTACGGAGAGACAAATCCAAATGCTT TGAATAAACAGCATTTTGAACTAGGTATAAAATTAAATTTAATGGATTTTGAACAAACTGCTAAAATTTCTGGAACTAGA TTTGTAACGTTAAAAGGTGATTTAGCAAAGCTAGAACGTGCTTTAATTAATTTTATGGTTGATGTTCATACTAAAGAGTG GGATTTCTTTGAGATATCACCTCCGGTATTAGTGCGAGATAATGCTATGTATAATGCAGGACAACTACCTAAATTTGCCC AAGAGTCTTTTGTAACAACCAATGGTTACAGACTAATTCCAACCGCAGAAGTATCTTTAATAAATATAGTCGCCGATGCT ATTATACCAAGAGAAAAATTACCGATGCGTTATGTTGCTTACACCCCGTGCTTTAGATCAGAAGCAGGTAGTAGCGGTAG AGATACAAGAGGTATGATTAGATTACATCAGTTCGGTAAAGTTGAGCTAGTATCTATTACTACCCCTGAAGAATCAAAAA ATGAACATGAATATATAACTAATGCATCAGAGACTATTTTACAAAAACTGAATCTTCCTTATCGTGTTATGTTACTTTGC ACCGGAGATATGGGATTTGCGGCAAAAAAAACCTATGATATAGAAGTATGGCTTCCGGGACAAAAGCAATATCGTGAAAT TGCTAGCTGTTCTAATTGTGGAGATTTTCAAGCACGTAGAATGAAAGCAAGATATAAAGAATTCGGCAGTAACGAAACTA CCTTAGTTCATACTTTAAATGCTTCAGGATTACCTATCGGAAGAACTATGGTTGCAATACTTGAAAATTATCAGAATGAA GATGGATCAATAACTATACCGGATGTCTTGATAAATTACATGGGAGGATTACAAAAAATCACTGCCTATAGTGAATAA Protein sequence : MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDGEKRKITSLIQEFQHARKVKSKILGNMASKSGEEFEGLQRDVKHIN EKLEALEQDLNNNNELNELLNMFPNIPDEEVPYGMDESMNKLVRTYGETNPNALNKQHFELGIKLNLMDFEQTAKISGTR FVTLKGDLAKLERALINFMVDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAQESFVTTNGYRLIPTAEVSLINIVADA IIPREKLPMRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKNEHEYITNASETILQKLNLPYRVMLLC TGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNE DGSITIPDVLINYMGGLQKITAYSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-79 | 45 |
