Gene Information

Name : rph (RJP_0674)
Accession : YP_004885016.1
Strain : Rickettsia japonica YH
Genome accession: NC_016050
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 856903 - 857622 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence :
ATGAGACAGTCAGGAAGAAAAAGCAATCAATTACGTCCTATTTCATTAGAGTTATCCCCGCTTATTAATGCGGAAGGTTC
ATGTCTTATTAAAATCGGTAATACACATGTCATGTGTAGTGCTACTTGTGAAACTACCGTACCGCCATTCTTGAGGGGAC
AAAATCAAGGCTGGATTACTGCCGAGTACGGTATGCTTCCCGGTTCTACATCACAGCGTATTAAAAGAGAAGCGGCATTT
GGGAAACAAGGCGGAAGAACGCAAGAGATACAGCGTTTAATAGGTAGGGCGATGCGATGTGTAATTGACGTGAGGAAACT
CGGCGAGAGGCAAATTATCATAGATTGTGATGTTATTAATGCTGACGGCGGTACTAGAACTGCAGCAATAACAGGGAGCT
ACGTAGCATTGCACCTAGCTATTAGGTCATTGATGAAAAAGAGAGTTTTAAAGGTGAACCCGTTAATTAGTCAAATTGCA
GCTATTTCTTGCGGTATATATAAAGGTGAGGCGATACTAGATTTGGATTATTTAGAAGATAGTGATGCGGACGTGGATAG
TAATTTTGTGTTTGCAGGTAACGGTAATTTAATCGAAGTACAAGGCACGGCAGAGAAAAATCCTTTTTCCGAAGAGCAGT
TTTTAGCAATGTTAAAACTTGCTAAAGGCGGAGCTGCGGAATTATTTACACTACAAAATCAGGTACTGATTGGGTCTTAG

Protein sequence :
MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWITAEYGMLPGSTSQRIKREAAF
GKQGGRTQEIQRLIGRAMRCVIDVRKLGERQIIIDCDVINADGGTRTAAITGSYVALHLAIRSLMKKRVLKVNPLISQIA
AISCGIYKGEAILDLDYLEDSDADVDSNFVFAGNGNLIEVQGTAEKNPFSEEQFLAMLKLAKGGAAELFTLQNQVLIGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-43 51