|
Name : lpdA2 (RJP_0556) Accession : YP_004884904.1 Strain : Rickettsia japonica YH Genome accession: NC_016050 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 711339 - 712718 bp Length : 1380 bp Strand : + Note : - DNA sequence : ATGCAAGAATTTGATTTAGTGGTAATAGGTAGCGGTCCAGCCGGTTATACAGGCAGTATTAGGGCTGCTCAGCTTGGTAT GAAAGTAGCGTGTATTGAGAAAAGCGATACTCTTGGCGGCACTTGTTTAAATATAGGATGCATACCATCGAAAGCTTTAC TTAATTCTTCCGAAAAATATGAAGCAGCTCTAAAACATTTTGAGAATATAGGTATTACTGCAGATGTAAAACTAGACTTA CAAAAAATGCTAGCTAATAAAGATAAAGTAGTTCTTGATCTTACAAAAGGTATAGAAAGTCTATTTGCCAAAAACAAAGT TACTAGGATAAAAGGTGAAGCTAAAATTAGCTCTAGTAATATCGTTGAAGTAAATAAAGAGCAAATTAAAGCCAAAAATA TCCTAATTACTACAGGTTCCAGCGTCATAGAAATACCGAATATCAAAATAGACGAAGAATTTATTGTTTCATCTACCGGT GCTTTGAAACTTTCTAAAGTACCTGAGAACTTAATAGTAGTCGGCGGAGGGTATATAGGCTTAGAACTTGGTTCAGTTTG GCGTCGTTTGGGAGCTAAAGTAACGATTATTGAGTATACACCGAGCATTGTACCTATGCTTGATAAAGAAATTGCTACAC AATTTATGAAACTACAGCAAAAACAAGGTATAGAGTTTAAACTGAATACTAAAGTGCTATCTGCTGAAGTAAAGTCAGGA AAAGTAAATCTGACAATAGAGGAGGGCGGTAAGAGTTCAGTAGTAACAAGCGATGTTGTGTTGATGGCGGTAGGCAGAAA AGCCTATACGCAAAATCTAGGACTTGAGTCTGTCGGTATTATTACGGATAAGCAAGGTAGCATTGAGATTAATGACCGGT TCCAAACAGCAATTTCAAATATTTACGCAGTCGGTGATGTGGTAAAAGGAGCTATGCTTGCTCATAAAGCCGAGGAAGAG GCTGTAGCTGCCGTGGAAATTATGGCAGGGCAGGCAGGACATGTTAACTATCACTTAATTCCAAGCGTAATATATACTTA TCCTGAAGTAGCAAGCGTCGGTGAAACGGAAGAACAGCTAAAAGAAAAAGGCATTAATTATAAAGTCGGTAAGTTTCCGT TTTTAGCAAATAGTAGAGCAAGAGCAATCGGTAGTACGGAAGGGATGGTTAAGATCCTTGCCGATAGTAAAACCGATAGG GTTTTAGGAGCGCATATTATAGGAGCTGATGCAGGTACATTAATTGCCTCGCTTACGGCTTATATGGAATTCGGAGCAGC TGCAGAAGATATAGCAAGAACCTGCCACGCTCACCCAACTTTAAGCGAGGCTATAAAAGAGGCAGCACTTAGTGTAGATA AGAGGACTATTAATATGTGA Protein sequence : MQEFDLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKALLNSSEKYEAALKHFENIGITADVKLDL QKMLANKDKVVLDLTKGIESLFAKNKVTRIKGEAKISSSNIVEVNKEQIKAKNILITTGSSVIEIPNIKIDEEFIVSSTG ALKLSKVPENLIVVGGGYIGLELGSVWRRLGAKVTIIEYTPSIVPMLDKEIATQFMKLQQKQGIEFKLNTKVLSAEVKSG KVNLTIEEGGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRFQTAISNIYAVGDVVKGAMLAHKAEEE AVAAVEIMAGQAGHVNYHLIPSVIYTYPEVASVGETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDR VLGAHIIGADAGTLIASLTAYMEFGAAAEDIARTCHAHPTLSEAIKEAALSVDKRTINM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 3e-73 | 41 |
