Gene Information

Name : OBV_09520 (OBV_09520)
Accession : YP_004880656.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2720
EC number : -
Position : 899498 - 900334 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence : 
ATGCCAAGAAAACGTGTTACACAAATATTTCCATGGCTGCTGCCACTGAGAATGAAGCAGCGCCTATTTTTCTTTTATAC
GGGGATGCGGCTGGATGGGAACCAATACGCCGAGGTTAAATCCGAAACCCCGCTGCCATATCAACTTTTTGAAACAAGTT
GTCCTTTATATAACCGAGAAACCGGCTTTGATATGGTGTATCAGGAGAATAAAGTTTTTAATTTGAAATTGGCCGCTGCC
ACTTTAGACAGAGTAGTTATCAGGCCAAATGAAACCTTCTCATTCTGGAAGCTGGTTCGATATGCCAACCGCGACATCCC
GTACAAGGATGGCCTGACCGTAATTGACAGGAAACTCACAACGGCCCCCGGCGGCGGGATGTGTCAAATGAGCAATCTGC
TCTTTTGGATGTTTCTCCATGCACCGCTCACCGTTATGGAACGGCACGGACATGATGTTAAGGATTTCCCGGAGCCGCCC
AGCGATGCGCCTATGGGTGTGGATGCGACCGTATCGGAGGGGTGGCTTGATCTGAAGGTCAGAAACGACACGGAGGCATC
CTTCCAGATCAGCATTGCTTTTGATGAAGATCGTATTATCGGACGCCTGCTGACCGATCAGGACACCAGGCAATTTTACG
AGGTTGTAAATGGAGAGCCATTGTATTACCGCAAGAACGATAAGGTCTATGAAGAAGTGGATGTGAATCAAAAAACGATT
TTGGCGGCAACCGGAGCCTGTACCTCCAAAAAGCTGCTCTATCGAAACAAATGCGAAATCGGCTATTCGCTCCCTGAAGG
GACGGAAGTCATGGGGAAAGGATCAAAAGAGAAATGA

Protein sequence : 
MPRKRVTQIFPWLLPLRMKQRLFFFYTGMRLDGNQYAEVKSETPLPYQLFETSCPLYNRETGFDMVYQENKVFNLKLAAA
TLDRVVIRPNETFSFWKLVRYANRDIPYKDGLTVIDRKLTTAPGGGMCQMSNLLFWMFLHAPLTVMERHGHDVKDFPEPP
SDAPMGVDATVSEGWLDLKVRNDTEASFQISIAFDEDRIIGRLLTDQDTRQFYEVVNGEPLYYRKNDKVYEEVDVNQKTI
LAATGACTSKKLLYRNKCEIGYSLPEGTEVMGKGSKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanWB YP_008394257.1 vancomycin B-type resistance protein VanW Not tested Not named Protein 2e-79 58
vanW NP_815953.1 vancomycin B-type resistance protein VanW Not tested Not named Protein 6e-80 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_09520 YP_004880656.1 hypothetical protein U35369.1.gene4.p01 Protein 3e-80 58
OBV_09520 YP_004880656.1 hypothetical protein AF310956.2.orf3.gene Protein 7e-80 58
OBV_09520 YP_004880656.1 hypothetical protein AE016830.1.gene2252. Protein 3e-80 58
OBV_09520 YP_004880656.1 hypothetical protein DQ212986.1.gene7.p01 Protein 4e-66 51
OBV_09520 YP_004880656.1 hypothetical protein AF253562.2.orf3.gene Protein 2e-46 43