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Name : OBV_08540 (OBV_08540) Accession : YP_004880558.1 Strain : Oscillibacter valericigenes Sjm18-20 Genome accession: NC_016048 Putative virulence/resistance : Unknown Product : putative RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : 2.7.7.49 Position : 810976 - 812499 bp Length : 1524 bp Strand : + Note : protein synonym:reverse trancriptase DNA sequence : GTGAGAAAGCGCCTCCGCTTCTACATCCCGCAAACGGTACGGCGAACAGAAATCCCAAAACCAAACGGCAAAATGCGGCC GCTGGGCATTCCCACCATCGGAGACCGGCTGATACAGCAATGTATTTTGCAGGTCTTAGAGCCGATATGCGAGGCGAAAT TTCATGAAAAGAGCTTTGGCTTTCGTCCCAACAGGAGCACGGAGCACGCCATAGCGCAGGTCTATAAATATATGCAGGTC GATAATCTGTCCTATGTTGTAGATATTGACATCAAAGGATTTTTCGACAATGTCAATCAAGGAAAACTGCTTAAGCAGCT GTGGACGCTTGGTATTCGCGATAAAAAGCTGCTGTGCATCGTCTCCGCTATGTTAAAGGCGGAGATCAAAGATGTTGGTA TCCCTGAAAAGGGCACGCCGCAGGGCGACATATTAAGTCCATTGCTCTCAAATATTGTGTTGAACGAGCTGGACTGGTGG ATTGCCAGCCAATGGGAAGAAATGCCACCCAAGCATATCAAGCCTTTCATCCGCAAAGACAACGGCAAAGAGGATAAGGG ATCAATATTTTTAGCCTACCGGGAACGAAGCAATCTAAAGGAATGCCACCTCGTGCGCTATGCGGATGATTTCAAAATCT TTTGCAGAAAACGCAGCGACGCGGACAAGATTTTTGAAGCCACAAAACTGTGGCTATGGGATAGGCTTCACTTGGAAATC AGTGAGGAAAAATCCAGTGTCACCAACCTGAAACGCCACTATTCCGAATATCTTGGCTTTCAGATACGTCTGCACAAAAA GGGTAAGACCAAGGGTGGAAAGCCCAGATACACCGTAAAATCTCACATTACCGAAAAAGCGGATAAGCGCATTAAAGACA GTCTGCACAAGCAAATCAGGAGCGTGCAAAAACCCATTGGTAATCGCAGTGGACACGCTTCGGTCGAGTGCTACAACGCC TATGTCATTGGCGTTCACAATTACTATGAAATAGCGACCTACGTAGCACAGGACTTCTATAAAATCAGCCATTCTGCCTA CAAGAGCCTAAGAGCACGATTAAAGAAACGCATGAAAAGAAGCGGCCAGTATATCTTGCCATATATCCAAGAAAAGTATG GACACAGTCAGCAAATACACTATGTGTATGATACGGCGCTCGCCCCGATTGGTGCAATTAAGCACCGCCCTCCCGGTATG CTGCGGGTGGCGGTCAACAAATATACGCACCAGGGCAGAGCTGGTATACACAGTAGATTGGAGACGGTCAACATGGCCGT CCTGACATTTTTAATGCGCAACCCGGTTCGAGATAGAACCATTGAGTTTAACGACAACCGCCTGTCCCTTTACTGCGGAC AGTGCGGAAAATGTGCAATCAGTGGAGAAAATCTTGAAATTGGGCATCTGCACTGCCATCATATTATCCCTTTGCAAAAG GCGGTACAAACAAATATGCAAACCTCGTGTTTTTGGCGGATAGGGTACACGTACTCCTACACGCCACGAGAGAAAAAACG CTGA Protein sequence : MRKRLRFYIPQTVRRTEIPKPNGKMRPLGIPTIGDRLIQQCILQVLEPICEAKFHEKSFGFRPNRSTEHAIAQVYKYMQV DNLSYVVDIDIKGFFDNVNQGKLLKQLWTLGIRDKKLLCIVSAMLKAEIKDVGIPEKGTPQGDILSPLLSNIVLNELDWW IASQWEEMPPKHIKPFIRKDNGKEDKGSIFLAYRERSNLKECHLVRYADDFKIFCRKRSDADKIFEATKLWLWDRLHLEI SEEKSSVTNLKRHYSEYLGFQIRLHKKGKTKGGKPRYTVKSHITEKADKRIKDSLHKQIRSVQKPIGNRSGHASVECYNA YVIGVHNYYEIATYVAQDFYKISHSAYKSLRARLKKRMKRSGQYILPYIQEKYGHSQQIHYVYDTALAPIGAIKHRPPGM LRVAVNKYTHQGRAGIHSRLETVNMAVLTFLMRNPVRDRTIEFNDNRLSLYCGQCGKCAISGENLEIGHLHCHHIIPLQK AVQTNMQTSCFWRIGYTYSYTPREKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 2e-114 | 51 |
| ef0012 | AAM75218.1 | EF0012 | Not tested | Not named | Protein | 3e-70 | 41 |
