Gene Information

Name : OBV_08030 (OBV_08030)
Accession : YP_004880507.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Unknown
Product : putative transposase orfB for insertion sequence element
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 766793 - 767590 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence :
ATGACGGAACTGACGATGGAACGCCTCAGGGAGAACCTTGAAAGCCTGAAAATGAAAAACACGCTGGAGATCCTGGACAA
TTATCTTGAGAGAGCTGTAAAAGACGAGCTTAACATCGTGGAGGTGCTCGACCATATCTTTGCAGAGGAGGCGCTCAGCA
AACGACGGCGCGCCTATGAAAAACAGGTGCAGATGTCGGGCTTTCCCATCAAAAAGACGTTGGAGGACTTTGATTTCAGT
TTTCAGCCCTCCATTGACAAGCGGCAGATCGAGGAACTGGCCACCATGCGTTTTCTGGAGAATGGAAAAAATATCGTCTT
TCTCGGCCCGCCCGGCGTGGGCAAGACCCATCTGGCCTCGGCGCTGGGGATGGTCGCCGCCAGGCATCGATTCTCCACTT
ACTACATTAACTGCCACTCACTGATTGAGCAGCTCAAAAAGGCCCATTTTGAAAACCGTCTTCCAGATAAGCTCAAAACT
CTGGGCAAATACAAGCTGCTCATCATCGACGAAATCGGGTATCTCCCAATGGATATTCAGGGGGCGAACCTGTTCTTTCA
GCTTATTGCCAGACGGTATGGAAAGGTCTCAACAGTCTTTACCTCCAACAAGACCTTTTCTCAATGGAACGAAATCTTCG
CCGACGTCACCATCGCCTCCGCGATCCTGGACCGCGTCCTGCACCACTGCACCGTCGTCAATATCAAGGGCGAAAGCTAC
CGCCTGAAAGAACGCAAAGAATATATGAAGCAAAAACAGCACATCGTCAATACCCTCTTCGAGCAGGGACAAAACTAA

Protein sequence :
MTELTMERLRENLESLKMKNTLEILDNYLERAVKDELNIVEVLDHIFAEEALSKRRRAYEKQVQMSGFPIKKTLEDFDFS
FQPSIDKRQIEELATMRFLENGKNIVFLGPPGVGKTHLASALGMVAARHRFSTYYINCHSLIEQLKKAHFENRLPDKLKT
LGKYKLLIIDEIGYLPMDIQGANLFFQLIARRYGKVSTVFTSNKTFSQWNEIFADVTIASAILDRVLHHCTVVNIKGESY
RLKERKEYMKQKQHIVNTLFEQGQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-45 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-45 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-45 41
unnamed CAA21402.1 - Not tested HPI Protein 9e-45 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-45 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-45 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-45 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-45 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-45 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-44 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-44 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_08030 YP_004880507.1 putative transposase orfB for insertion sequence element VFG1663 Protein 8e-46 41
OBV_08030 YP_004880507.1 putative transposase orfB for insertion sequence element VFG1627 Protein 4e-45 41
OBV_08030 YP_004880507.1 putative transposase orfB for insertion sequence element VFG1606 Protein 4e-45 41
OBV_08030 YP_004880507.1 putative transposase orfB for insertion sequence element VFG1515 Protein 4e-45 41