Gene Information

Name : OBV_08010 (OBV_08010)
Accession : YP_004880505.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Unknown
Product : putative transposase orfA for insertion sequence element
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 765580 - 766575 bp
Length : 996 bp
Strand : +
Note : -

DNA sequence :
ATGGAAGGAGCAAACTGGATGGATATCCGCGACCGGCAAAAAGGACTGAGCTACACGGAGATCGCGCACAAGTACAACCT
TGACCCGAGGACGGCGAAGAAATACGCCGAGAGCGAGACACGGCCGGTATACAGCCTGAGCGCGGCGAAGCCGTCAAAGC
TGGACCCGTACAAGGAGCAGATCGCAATATGGCTGGAGGAAGCGCCGTACTCAGCGGAGCGAATTCCGGAAAAGATCCGG
GAGCAGGGCTTTGACGGCGGGCACAGCATCGTGCGAGAATACGTACGCAACAAAAAGGAGCAGCTGGACGAGAAGGCAAC
GGTGCGGTTTGAGACAATGCCGGGGCTGCAAGGGCAGATGGACTGGGCATTTTTCGAGGATCACACCGTCATGGAGGGCG
GAAAGCTGAAGAAGCTGTACTGCTTTCTGTTTATTCTCGGATACTCACGGGCGCGGTACATAGAGTTTGTGACCGACATG
AGCACAAACACACTGATCCGCTGCCATGCCAACGCGTTCCGGTACTTCGGCGGATACCCCGAGGAAATCCTGTACGACAA
CATGAAACAGGTCGTCATCAAGCGGCTGCTGAAGCAGGAGGACAGCACCCTGAACCGGCAGTTTGAGGACTTTGCCGGGT
TCTACGGCTTCAAGCCTGTGCTGTGCAGGCCATACCGGGGCCAGACGAAAGGCAAGGTGGAGCGCACCGTACAGTTCGTC
CGGGATAATTTCATGGTGGGCATCAAGTATAGCTCCTTGTATGACCTCAACGGCCAGGCGCTGGCCTGGTGCAGCAAGGT
CAATGGAAAGGTGCATGCCACAACAAATGAGATTCCCTTCGAGCGATTAAAAAAAGAGGGCCTCAACCCTCTCAACGCGA
ATATATTATCGACAAAATTAACCTGCGCCGGGTGCAAAAAGACTGCCTCATCTCGTACGGCGGTAATCAGTATTCCGTGC
CATCAGAATACGCCGGCAAAGATGTGGCAGTCGTAG

Protein sequence :
MEGANWMDIRDRQKGLSYTEIAHKYNLDPRTAKKYAESETRPVYSLSAAKPSKLDPYKEQIAIWLEEAPYSAERIPEKIR
EQGFDGGHSIVREYVRNKKEQLDEKATVRFETMPGLQGQMDWAFFEDHTVMEGGKLKKLYCFLFILGYSRARYIEFVTDM
STNTLIRCHANAFRYFGGYPEEILYDNMKQVVIKRLLKQEDSTLNRQFEDFAGFYGFKPVLCRPYRGQTKGKVERTVQFV
RDNFMVGIKYSSLYDLNGQALAWCSKVNGKVHATTNEIPFERLKKEGLNPLNANILSTKLTCAGCKKTASSRTAVISIPC
HQNTPAKMWQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 3e-37 41
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 3e-37 41
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 4e-37 41
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 3e-37 41
y2411 NP_669718.1 transposase Not tested HPI Protein 4e-37 41
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-37 41
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 4e-37 41
unnamed CAA21403.1 - Not tested HPI Protein 4e-37 41
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 4e-37 41
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 3e-37 41
api83 CAF28557.1 transposase Not tested YAPI Protein 3e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_08010 YP_004880505.1 putative transposase orfA for insertion sequence element VFG1626 Protein 1e-37 41
OBV_08010 YP_004880505.1 putative transposase orfA for insertion sequence element VFG1607 Protein 1e-37 41
OBV_08010 YP_004880505.1 putative transposase orfA for insertion sequence element VFG1461 Protein 2e-37 41
OBV_08010 YP_004880505.1 putative transposase orfA for insertion sequence element VFG1514 Protein 1e-37 41