Gene Information

Name : OBV_43970 (OBV_43970)
Accession : YP_004884101.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Virulence
Product : putative transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 4149648 - 4150928 bp
Length : 1281 bp
Strand : +
Note : -

DNA sequence :
ATGTCACTTGGAATTTTCTTTTTGGCATTGATCCTTCTGATGCTGGTTGGCGTACCAGTGGCCTTTTCCATGGCGCTGGC
TTCCGCGGGATATATGATCGCGATGGGGACGGATCTTTCCATGGTCGTTCAACGCATGGTGAGCGGAGCCGACAGCTTTA
CAATGCTTGCCATTCCCTTTTTCTTCATGGCCGGCGAGCTGATGAATATCAGCGGTGTAACAGACAAAATCATTCGACTG
GCAAAGGTTCTGGTGGGCCATTTTAAGGGCGGCCTGGCACAGGTGAATATTGTGGCCTCCGTGTTTTTTGCCGGTGTCTC
CGGCTCGGCCACAGCGGATACCGCCGCCTTGGGCAGCGCTCTGATCCCGGCCATGGTAAAAGAGGGCTATTCCCTGGACT
TTTCCGCCGCAATCACAGTGGCATCCTCCTGCGTGGGTCCGATTATTCCGCCCAGCATTACTCTGGTGCTTTACGGAATT
CTGGCTCAGGCGGATGTAGGCCGTCTGTTAATTGCAGGAATCTTGCCAGGACTCTTAATTGCACTTTTTCAGATGGGCTA
TACCTACTTTTATTCAAAGAAAATGGGCTATCCTTCCGATCCCCGCGCGACCCGCAAAGAAGCCTGGGCAGCCACTAAGG
GCGGTGTCACCGCCCTGATGATGCCCATTATTATTATCGGCGGTACGATGAGCGGTGTCTTTACCCCGACGGAATCTGCT
GCGATTGCAGTTGCCTATGGTATTATAATTGGCTTTTTTGTATATCGCAACCTGACGGTTAAGCAGTTTTACTCATCTTT
GAAGAAGGTGGGGGTAGACAGCATGAATAACTTGTTTATTCTGGCTGCAGCCGCCTGCTTTTCCTGGGTAATGACTATGT
CCAAGGCCCCGGAGCATCTGGTAGTTGCCATGACCTCTCTGACCAGCAACCGGACTTTGCTGATCCTGCTCATCTTGCTG
ATTCTGATCATCATCGGATTTTTTATGCAGGCCAGCCAGGCGTTGATGGTACTGGCGCCGATTCTCGTTCCGGTAGCCAC
GGCAATTGGTATCGATCCCGTTCATTTTGGCCTGATTATGGTAGTCACTCTGACCTTTGGCGGCTGTACTCCCCCCGTGG
GAAGTATGCTCTTTGTGGTCAACAGCATTACTAAAATGGGGTTCTCCCGTCTGACAAAAGCAATGCTGCCGCTGTATCTT
CCATTGATTCTGGCCATTCTTATCATCACTTTTATTCCTCAGCTGAGCCTGTTTCTCCCCAATCTTGTTTTCGGTTCCTG
A

Protein sequence :
MSLGIFFLALILLMLVGVPVAFSMALASAGYMIAMGTDLSMVVQRMVSGADSFTMLAIPFFFMAGELMNISGVTDKIIRL
AKVLVGHFKGGLAQVNIVASVFFAGVSGSATADTAALGSALIPAMVKEGYSLDFSAAITVASSCVGPIIPPSITLVLYGI
LAQADVGRLLIAGILPGLLIALFQMGYTYFYSKKMGYPSDPRATRKEAWAATKGGVTALMMPIIIIGGTMSGVFTPTESA
AIAVAYGIIIGFFVYRNLTVKQFYSSLKKVGVDSMNNLFILAAAACFSWVMTMSKAPEHLVVAMTSLTSNRTLLILLILL
ILIIIGFFMQASQALMVLAPILVPVATAIGIDPVHFGLIMVVTLTFGGCTPPVGSMLFVVNSITKMGFSRLTKAMLPLYL
PLILAILIITFIPQLSLFLPNLVFGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-52 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-52 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_43970 YP_004884101.1 putative transporter VFG1110 Protein 1e-52 41