Gene Information

Name : OBV_39090 (OBV_39090)
Accession : YP_004883613.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Virulence
Product : putative transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 3677840 - 3679126 bp
Length : 1287 bp
Strand : +
Note : -

DNA sequence :
ATGAGTACGCCAATGATCGTCGCAATTGTCATTCTTGTCATCGCGTTCATTATAAAAATGCCCATTGCGATGGGAATGCT
GCTTTCCTCACTGTCTTATTTGATTCTGATGCACATGGACATGAGCCTGGTCGCTGAAATATTTTGCAGTAAAATGTTCA
ACAATTTCATATTGCTGGCGGTTCCGCTTTTTATCTTTGCCGCAAATATTATGAATTCCAGCAAGGTAACAGAGAAAATT
TTTGGATTTGCAACTGCCTTGGTAGGCAGATGGCAGGGCGGTTTGGGACATGTCAACGTCGTGGCATCTCTCATTTTTTC
CGGGATGACAGGCTCCGCTGTGGCTGATGCTTCCGGTTTGGGAATTATGGAAATTGACGCCATGCGCAAAGAGGGATATG
ACGATGGCTTTAGCGCGGCAATTACCGCCAGCTCAGCGGTCATCGGCCCAATTTTTCCACCCAGCATTCCTCTTGTTATT
TACGCCGTCATTGCCGGGGCTTCTATTGGAAATCTGTTTTTAGCCGGTATGGTTCCCGGCATACTGCTTGCAATTGCACT
CTGCGTTTATGTTGCAATCATTGCCAAACAAAGAAATTATCCATGCGGCGTCAGATATATCAAAAATCAATTTCTTCGCA
TGACCCTTACCGCGCTCCCGGCTTTGCTGACTCCAGTGATTCTTCTGATGGGAATTTATACAGGCGTCATGACTGCTACG
GAGGCGGGTGCCGTTGCGGCGCTGTATGCGCTGGTAATTCCCGTCGTATTCTACCGCTCCTTCGGTTGGGGGGACCTGAA
AGAAGTTCTGCGCAGCACTGTAAAATCCACGGGTCAAATAGGCATTATGCTGGGGGCGGCGTATGTTTTTTCATATGTGA
TTGCAATGGAGAATCTCCCTGAGCTTGCGGGAAATATAATTTTGTCCTTTGCAGATACTCCGGGAAAATTTCTCCTTCTT
ACAAACATTTCTCTGCTTATTTTAGGCATGCTTCTGGATTCCTCTGTCTTACAGCTGGTATTTCTGCCGATTCTGGTTCC
GATTGCAACAAAGTTCGGAATCGACCTGGTTCATTTCGGCGTCATCTTTACGCTGAATACAATGATTGGTTTGTGCACGC
CTCCTTTTGGAATGTTACTCTTTATTGTGACGGGAATTTCCGGCGAGAAAATGAAAGTCGTTATTAAAGAGATTATGCCC
ATGATCGTGGTTATGGTGATTGTTCTACTTATTGTCACATATTTTCCGGACGTGGTCCTATGGGTGCCAAGACTCTTTGG
GATCTGA

Protein sequence :
MSTPMIVAIVILVIAFIIKMPIAMGMLLSSLSYLILMHMDMSLVAEIFCSKMFNNFILLAVPLFIFAANIMNSSKVTEKI
FGFATALVGRWQGGLGHVNVVASLIFSGMTGSAVADASGLGIMEIDAMRKEGYDDGFSAAITASSAVIGPIFPPSIPLVI
YAVIAGASIGNLFLAGMVPGILLAIALCVYVAIIAKQRNYPCGVRYIKNQFLRMTLTALPALLTPVILLMGIYTGVMTAT
EAGAVAALYALVIPVVFYRSFGWGDLKEVLRSTVKSTGQIGIMLGAAYVFSYVIAMENLPELAGNIILSFADTPGKFLLL
TNISLLILGMLLDSSVLQLVFLPILVPIATKFGIDLVHFGVIFTLNTMIGLCTPPFGMLLFIVTGISGEKMKVVIKEIMP
MIVVMVIVLLIVTYFPDVVLWVPRLFGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 8e-50 48
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 1e-49 48
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 1e-49 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_39090 YP_004883613.1 putative transporter VFG1110 Protein 5e-50 48