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Name : topB (OBV_30280) Accession : YP_004882732.1 Strain : Oscillibacter valericigenes Sjm18-20 Genome accession: NC_016048 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2866256 - 2868295 bp Length : 2040 bp Strand : + Note : - DNA sequence : ATGAAACTTGTGATCGCTGAAAAACCATCTGTCGCGCAGTCCATCGCCGCCGTTCTCGGCGCGAAGCAGCGCGGCGGCGG ATATTTGGAGGGCAGCGGCTGGCTGGTATCATGGTGCTTCGGGCATCTGGCCGAGCTTGCCAGCGCTGAGAGCTACAACC CGGAGTACGCCAAGTGGAAGTACGACGATCTGCCCATCGTGCCGGAAACGTGGCGCTTTAAGGTCAGCCGCGACAAATGG CAGCAGTTCGATATTCTGAAAAAGCTGATGCACAGCGAGGACGTGAGCGAGGTTGTCAACGCCTGCGACGCCGGGCGCGA GGGAGAATTGATCTTCCGCACCGCGTATTGTCTGGCTGGTTGCAGCAAGCCAATGAAACGCCTCTGGATTTCCTCGATGG AGGATTCCGCCATCCGCGATGGCTTTGCACACCTGAGACCGGGCAGCGACTACGACGGTCTGCATCAGTCCGCGCTTTGC CGGTCAAAGGCGGATTGGCTCGTCGGCATCAACGCGACCCGCCTGTTCTCCGTGCTCTACCACCGCACCCTGAACGTGGG TCGCGTCATGTCCCCGACGCTGGCGCTCATCGTCCAGCGCGAGGCCGAGATCGACGCCTTCAGGGCGGAGCCGTTCTATA CCGTGGAGCTGGACGTGGGCTTTCCCGCCGTGTCCGAAAAGTTCAGGGAGGAATCTCAGGCCAAGGCTGTGGCGGCCGCC TGTCAGGGGCAGCCTGCTGCCGTCAAGAGCGTAGAGCGCAAGGAGAAATCCGAAAAGGCTCCGGCGCTCTACGATCTGAC CACGCTCCAGCGCAACGCCAACCGCTTGCTAGGTTACACAGCCCAGCAAACGCTTGATTATCTCCAGTCACTCTACGAAA AGAAGCTCTGCACCTACCCGCGCACCGACGCCCGTTTCCTCACCGACGATATGGAGGGCAGCGTTCCGGCGCTGGTATCC GTGGCCGCCACGTTGTACGAAGCAGCCGCGCCGGGCAAAATCGGCGCGGCGCAGATCTGCGACAGTAAAAATGTCAGCGA CCATCACGCGCTGGTTCCCACTGTCAGCGCGGGCAAAGCCGCCCTTTCCGCTCTGCCCGCCGGGGAACGGAAAATCCTGC GCCTTGTGTCGCGGCAGCTCCTGTGCGCCGTCAGCGAAGCCTGCCGCTATGCCGAGACCGTTGCCGCTGTCGAGTGCGGC GGCAGCGTCTTTACGGCCAAGGGCAGGACGGTCCTTGCTCCCGGCTGGAAAAACTACATTCAGCAGGAGCAGCCTGAAAA ACCGCTGCCTGATCTCACCGATGGACAGGCCCTCACGGTGTCCGGCATCAGCACCAAAGAGGGCAAAATGACGCCGCCCA AGCACTACACCGAAGATACGCTGCTTTCCGCGATGGAGGTCGCCGGTGCCAAAGAGACGCCCGACGATGCTGAACGAAAA GGGCTGGGTACTCCCGCTACCCGCGCCGCCATTCTGGAAAAGCTGGTGTCCACCGGCTTTGTGGAACGCAAAAAGGCCAA GAAAACCGTCAGCCTCATGCCGTCCCACACCGGCGTGTCGCTCATCACGGTACTGCCGGAGCAGCTTCAGTCGCCCTTGC TCACCGCCGAATGGGAACAGAAACTCAAACAAGTAGAGCGCGGCGAGCTGACGGCGGACGCCTTTCTGGACGGCATTACC GCCATGCTGCGGGAGTTGGTCAAGACCTACAAGGCCATCAAGGGCGCGGAGGTGCTTTTCCCGTCCGGGCGCGAGGTTGT GGGCAAATGTCCCCGCTGCGGCGGCGACGTAACCGAGAGCAAAAAGGGCTTTTTCTGTGAAAGTGCCGATTGCCGCTTCG GTCTGTGGCGCGACAACAAATTCCTGACAGCGAAAAGGGCCGTGCTGGACAAGAAAGCGGTCACAGCGCTTTTGAAAACC GGGCGTGTCGCCATGACCGGCCTCTATTCCGAAAAGACGGGCAAGACCTACGACGCCACGCTGGTACTGGAGGACGACGG CCAGCGGGCAAATTTCAAGCTGGAGTTTAACCATGGATGA Protein sequence : MKLVIAEKPSVAQSIAAVLGAKQRGGGYLEGSGWLVSWCFGHLAELASAESYNPEYAKWKYDDLPIVPETWRFKVSRDKW QQFDILKKLMHSEDVSEVVNACDAGREGELIFRTAYCLAGCSKPMKRLWISSMEDSAIRDGFAHLRPGSDYDGLHQSALC RSKADWLVGINATRLFSVLYHRTLNVGRVMSPTLALIVQREAEIDAFRAEPFYTVELDVGFPAVSEKFREESQAKAVAAA CQGQPAAVKSVERKEKSEKAPALYDLTTLQRNANRLLGYTAQQTLDYLQSLYEKKLCTYPRTDARFLTDDMEGSVPALVS VAATLYEAAAPGKIGAAQICDSKNVSDHHALVPTVSAGKAALSALPAGERKILRLVSRQLLCAVSEACRYAETVAAVECG GSVFTAKGRTVLAPGWKNYIQQEQPEKPLPDLTDGQALTVSGISTKEGKMTPPKHYTEDTLLSAMEVAGAKETPDDAERK GLGTPATRAAILEKLVSTGFVERKKAKKTVSLMPSHTGVSLITVLPEQLQSPLLTAEWEQKLKQVERGELTADAFLDGIT AMLRELVKTYKAIKGAEVLFPSGREVVGKCPRCGGDVTESKKGFFCESADCRFGLWRDNKFLTAKRAVLDKKAVTALLKT GRVAMTGLYSEKTGKTYDATLVLEDDGQRANFKLEFNHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB-2 | NP_815968.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 57 |
| EFAU085_00720 | YP_008394244.1 | DNA topoisomerase III | Not tested | Not named | Protein | 7e-171 | 53 |
