Gene Information

Name : rph (OBV_29790)
Accession : YP_004882683.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2822545 - 2823261 bp
Length : 717 bp
Strand : -
Note : protein synonym:RNase PH; protein synonym:tRNA nucleotidyltransferase

DNA sequence :
ATGACCAGAATTGACGGCCGGGCTTTTGACCAGCTGCGGCCTGTAAAAATTACCACCGACTTTGTGAAATTTCCGGAGGG
GAGCTGTCTCATCGAGTGTGGAAACACAAAGGTCCTCTGCTGTGCCAGTGTGGAGGACCGGGTACCGCCCCATGTGGCGG
AGGGGACCGGCTGGGTGACGGCGGAGTACAATATGCTGCCCCGGGCCAACCGGGAGCGGAGCAGGCGGGATATCTCCAAG
CTGAAGCTGTCCGCCCGCAGCGCGGAGATCCAGCGGCTGGTGGGCCGGTCCCTCCGGGCCGCCGTGGATCTGAATCGGCT
GGGGGAGCGGACGATCACCGTCGACTGCGACGTTTTACAAGGTGACGGCGGGACCCGGACGGCCTCCGTCACCGGCGGCT
TCATCGCACTGTCTCTGGCTCTTCGCAGGCTGGTAGAGGAGGGCGCTTTGGAGGAGATGCCTTTGAAGACCTCCGTGGCG
GCGGTGTCCGCGGGGATTGTGGACGACAGAACGCTGCTGGACCTTTGCTATGAGGAGGATTCGGCGGCGCAGGTGGACCT
GAACTGCGTTATGACCGGCGACGGACGGCTGGTGGAACTACAGGGCACCGGCGAGGGCCGCGCCTTTACGTTCGAAGAAC
AGCGGGCGCTGGTGGACCTGTGCGCCAGGGGCATCCAGGAGATTCAGTCCATCCAGAAAACCGTGTTGGGAGGTTGA

Protein sequence :
MTRIDGRAFDQLRPVKITTDFVKFPEGSCLIECGNTKVLCCASVEDRVPPHVAEGTGWVTAEYNMLPRANRERSRRDISK
LKLSARSAEIQRLVGRSLRAAVDLNRLGERTITVDCDVLQGDGGTRTASVTGGFIALSLALRRLVEEGALEEMPLKTSVA
AVSAGIVDDRTLLDLCYEEDSAAQVDLNCVMTGDGRLVELQGTGEGRAFTFEEQRALVDLCARGIQEIQSIQKTVLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-52 54