Name : lysS (OBV_25580) Accession : YP_004882262.1 Strain : Oscillibacter valericigenes Sjm18-20 Genome accession: NC_016048 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2402640 - 2404142 bp Length : 1503 bp Strand : + Note : protein synonym:lysine--tRNA ligase DNA sequence : ATGGCTGAACAGAAGATAAACCAGCAGCCCGAGCAGGATCTGAGTGAGCAGACCCGGATTCGCCGGGAGAAGCTGGCGGC GCTCCAGGCCGCAGACGAGGATCCGTTCCGGCATACCCGATTCGACTGGGATGCCACCAGCGAGCAGATCAAGTCCAATT TTGACGCCATGGAGGGCAAGCCTGTGAAGATCGCGGGCCGCCTCATGAGCAAGCGGGGCATGGGCAAGGTCAGCTTCTGC GATCTGCAGGACCGGGACGGCCGCATCCAACTCTACGCCCGGCAGGACGAGATGGACGAGAATACCTATAAAAAATTCAA GAAATACGACATCGGCGATATCGTGGGCGTGGATGGCGAGGTGTTTCGCACCCAGCGGGGCGAGATGAGCGTCCGGGCCA AGGACATCGTGCTTTTGTCTAAGGCCCTGTTGCCCCTGCCGGAGAAGTTCCATGGGCTTACAGACCGTGAGCTGCGCTAC CGCCAGCGGTATGTGGATCTTATTGTGAATCCGGAGGTCAAGCGGGCTTTTGTGGTCCGGTCCAGGCTTATCAAGCACAT ACGGAACTTTCTTGACGATCTTGGCTATATTGAGGTGGAAACCCCCGTCCTGAATACCATTTCCGGCGGCGCATCCGCCC GCCCCTTTGTGACCCATCACAATACGCTGGACATCGATATGTACATGCGCATCGCCACGGAGCTCCCGCTGAAGCGGCTG ATCGTGGGCGGAATGGACCGGGTCTATGAGATCGGCCGCATCTTCCGCAACGAGGGTATGGACCCCAGACACAATCCGGA ATTCACCAGCGTGGAGCTCTATCAGGCCTATACCGATTTCCACGGGATGATGGACGTGGCCGAGGGACTGATCTCCTCTG CTGCAAAGGAGATTCTGGGCACTTATGAAGTCGAGTGGATGGGTGAAAAGATCGATCTGGCCCCCGGCTGGCCCCGCCTG ACCATGATCGAAGCGGTGAAGCAATACGTGGGCATTGATTTCGGCACCATCTCCGACGACGTAGAGGCCGTTGCCGCCGC GAAAGCCAAGGGCGTGGAGTTGGCGGACAGCGCCGAGAAAACCTGGGGCAACGCCCTGTACCAGTGCTTTGACCAGCGGG TGGAGGATCATTTGATCCAGCCCACCTTTATCACCATGTACCCCGTGGAGGTCTCTCCGCTGACGAAGCGCAGCCCTCAG GACCCCCGTCTTACCGAGCGGTTTGAGTTTTTCATCTACCACAGCGAGATGGGCAACGCCTATTCCGAGCTGAACGATCC CATTGACCAGCGCCGGCGCTTTGAAAAGCAGGCAGAACTGCGGGAACGGGGCGACGACGAGGCGGAGATGCTGGACGAGG ATTTCCTCACGGCCATGGAATACGGTATGCCCCCCACCGGCGGCATGGGCATCGGCGTGGATCGGGTTGCCATGATGCTG ACCAATTCCGATACTATTCGGGACGTGATTCTGTTCCCCACCATGAAGCCGCTGGATGACTGA Protein sequence : MAEQKINQQPEQDLSEQTRIRREKLAALQAADEDPFRHTRFDWDATSEQIKSNFDAMEGKPVKIAGRLMSKRGMGKVSFC DLQDRDGRIQLYARQDEMDENTYKKFKKYDIGDIVGVDGEVFRTQRGEMSVRAKDIVLLSKALLPLPEKFHGLTDRELRY RQRYVDLIVNPEVKRAFVVRSRLIKHIRNFLDDLGYIEVETPVLNTISGGASARPFVTHHNTLDIDMYMRIATELPLKRL IVGGMDRVYEIGRIFRNEGMDPRHNPEFTSVELYQAYTDFHGMMDVAEGLISSAAKEILGTYEVEWMGEKIDLAPGWPRL TMIEAVKQYVGIDFGTISDDVEAVAAAKAKGVELADSAEKTWGNALYQCFDQRVEDHLIQPTFITMYPVEVSPLTKRSPQ DPRLTERFEFFIYHSEMGNAYSELNDPIDQRRRFEKQAELRERGDDEAEMLDEDFLTAMEYGMPPTGGMGIGVDRVAMML TNSDTIRDVILFPTMKPLDD |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-111 | 49 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
lysS | YP_004882262.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-111 | 49 |