Gene Information

Name : OBV_02540 (OBV_02540)
Accession : YP_004879958.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Resistance
Product : putative drug efflux ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 240744 - 241481 bp
Length : 738 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGCGCTGATTGAATTTCAGGACGTCTCAAAGGTCTATGAAATGGGCGATTCTGTAGTCCGGGCCGCGGATCACAT
TTCCATGCAGATTCAAAAAGGCGAATTTGTGGCCATCGTGGGTCAGTCCGGCTCCGGAAAATCCACCTGCATGAATATTA
TCGGCTGTCTGGACGTCCCCTCCTCCGGCACATATCTGCTGGACGGTCAAGACGTTGGCAAAATGAATAAAAACCAGCTG
GCTGAAATCCGCAACAAGATGTTGGGCTTTATCTTCCAGCAGTACAATTTGCTGCCCAAGCTGACGCTGCTGGAAAATGT
AGAGGTCCCCATGATGTATGCCGGCGTTTCAAGGAGTGACCGGCGGGAGCGGGCCAGGGTGGCCTTGGAGATGGTGGGCC
TTGGAAGCAAGGTAAACCACCGGCCCGCCCAACTCTCCGGCGGCCAGCAGCAGCGTGTTTCCATTGCCCGGGCTCTGGTG
GGAGAACCGGCGGTGATTCTGGCCGATGAGCCCACCGGCGCACTGGACTCCCACACCGGGCGGGAGGTGCTGTCCCTTTT
ACAGCAGCTCCACGCCGCAGGCAACACCGTGGTTCTCATTACCCATGATAACTCCATCGCCGTTCAGGCCCAGCGCATTA
TCCGTCTGGAGGACGGCCGCGTCATTTACGACGGGGACGCCCACGCGCCGGAGGCGGTGGTATCGCCGAATCTGGCGGGA
ACGGGAGGCGGACAATGA

Protein sequence :
MSALIEFQDVSKVYEMGDSVVRAADHISMQIQKGEFVAIVGQSGSGKSTCMNIIGCLDVPSSGTYLLDGQDVGKMNKNQL
AEIRNKMLGFIFQQYNLLPKLTLLENVEVPMMYAGVSRSDRRERARVALEMVGLGSKVNHRPAQLSGGQQQRVSIARALV
GEPAVILADEPTGALDSHTGREVLSLLQQLHAAGNTVVLITHDNSIAVQAQRIIRLEDGRVIYDGDAHAPEAVVSPNLAG
TGGGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_02540 YP_004879958.1 putative drug efflux ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-52 51
OBV_02540 YP_004879958.1 putative drug efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-48 47
OBV_02540 YP_004879958.1 putative drug efflux ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-41 46
OBV_02540 YP_004879958.1 putative drug efflux ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-40 46
OBV_02540 YP_004879958.1 putative drug efflux ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-34 43