Gene Information

Name : OBV_24570 (OBV_24570)
Accession : YP_004882161.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Unknown
Product : putative transposase orfB for insertion sequence element
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2332437 - 2333240 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence :
ATGACGGAACTGACGATGGAACGCCTCAGGGAGAACCTTGAAAGCCTGAAAATGAAAAACACGCTGGAGATCCTGGACAA
TTATCTTGAGAGAGCTGTAAAAGACGAGCTTAACATCGTGGAGGTGCTCGATCATATCTTTGCAGAGGAGGCGCTCAGCA
AACGGCGGCGCGCCTATGAAAAACAGGTGCAGATGTCGGGCTTTCCCATCAAAAAGACGTTGGAGGACTTTGATTTCAGT
TTTCAGCCCTCCATTGACAAGCGGCAGATCGAGGGACTGGCCACCATGCGTTTTCTGGAGAATGGAGAAAATATCGTCTT
TCTCGGCCCGCCCGGCGTGGGCAAGACCCATCTGGCCTCGGCGCTGGGGATGGTCGCCGCCAGGCATCGATTCTCCACTT
ACTACATTAACTGCCACTCACTGATTGAGCAGCTCAAAAAGGCCCATTTTGAAAACCGTCTTCCAGATAAGCTCAAAACT
CTGGGCAAATACAAGCTGCTCATCATCGACGAAATCGGGTATCTCCCAATGGATATTCAGGGGGCGAACCTGTTCTTTCA
GCTTATTGCCAGACGGTATGAAAAGGTCTCAACAGTCTTTACCTCCAACAAGACCTTTTCCCAATGGAACGAGATCTTTG
CTGATATCACCATCGCCTCCGCGATACTCGATCGTGTTCTGCACCACTGTACCGTCGTCAATATCAAGGGCGAAAGCTAC
CGGCTAAAAGAACGCAAAGAATATATGAAGCAAAAACAGCACATCGTCAATACCCTCTTCGAGCAGGGACAAAACCAATT
TTAG

Protein sequence :
MTELTMERLRENLESLKMKNTLEILDNYLERAVKDELNIVEVLDHIFAEEALSKRRRAYEKQVQMSGFPIKKTLEDFDFS
FQPSIDKRQIEGLATMRFLENGENIVFLGPPGVGKTHLASALGMVAARHRFSTYYINCHSLIEQLKKAHFENRLPDKLKT
LGKYKLLIIDEIGYLPMDIQGANLFFQLIARRYEKVSTVFTSNKTFSQWNEIFADITIASAILDRVLHHCTVVNIKGESY
RLKERKEYMKQKQHIVNTLFEQGQNQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-45 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 9e-46 42
unnamed CAA21402.1 - Not tested HPI Protein 1e-45 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-46 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 9e-46 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 9e-46 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 9e-46 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 9e-46 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 9e-46 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-45 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-45 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OBV_24570 YP_004882161.1 putative transposase orfB for insertion sequence element VFG1663 Protein 1e-46 42
OBV_24570 YP_004882161.1 putative transposase orfB for insertion sequence element VFG1627 Protein 5e-46 42
OBV_24570 YP_004882161.1 putative transposase orfB for insertion sequence element VFG1606 Protein 5e-46 42
OBV_24570 YP_004882161.1 putative transposase orfB for insertion sequence element VFG1515 Protein 5e-46 42