Gene Information

Name : ssb (OBV_19910)
Accession : YP_004881695.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1887976 - 1888392 bp
Length : 417 bp
Strand : +
Note : protein synonym:helix-destabilizing protein

DNA sequence :
ATGCTCAATAAAATCATCCTCATGGGCCGTCTGACTCGCGATCCGGAACTGCGACGCACCGGCAGCGGTACGGCGGTGAC
ATCCTTCGCCCTGGCGGTGGATCGGGATTACAAGTCCCAGAACGGCGAGAAGGAGACGGACTTCATCGACATTGTGGCAT
GGCGTGCCACCGCTGAGTTTGTCAGTAAATACTTCTCCAAGGGCCGCATGGCCGTGGTAGAGGGCCGCTTGCAGCTCCGG
GATTGGACGGACAAGCAAGGCAATAAGCGCCGCTCTGCTGAGGTTATTGCCGATAACGTGTATTTTGCAGACTCAAAAAA
AGATGTGTCCAATTCGGGCACATCTGCTCCGGCTCCTGTGGATGCCCGCAGTGATTTTTCGGAAGTCGATACGGAAGACG
GGGAGTTGCCGTTTTGA

Protein sequence :
MLNKIILMGRLTRDPELRRTGSGTAVTSFALAVDRDYKSQNGEKETDFIDIVAWRATAEFVSKYFSKGRMAVVEGRLQLR
DWTDKQGNKRRSAEVIADNVYFADSKKDVSNSGTSAPAPVDARSDFSEVDTEDGELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-23 49
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 8e-18 48
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-22 48
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 4e-24 41