Gene Information

Name : ssb (OBV_12860)
Accession : YP_004880990.1
Strain : Oscillibacter valericigenes Sjm18-20
Genome accession: NC_016048
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1234627 - 1235079 bp
Length : 453 bp
Strand : -
Note : protein synonym:helix-destabilizing protein

DNA sequence :
ATGCTCAACAAGATCATTCTCATGGGTCGTCTCACCCGGGATCCCGAACTGCGCCGCACCGGAAGCGGCACAGCCGTGAC
ATCTTTCTCCTTGGCCGTGGACCGGGACTTCAAGTCCCAGAGCGGCGAGAAGGAGACGGATTTCATCGACATCGTCGCAT
GGCGCGCTACCGCGGAATTTGTCAGCAAGTACTTCACCAAGGGCCGTATGGCCGTTGTGGAGGGCCGTCTGCAGCTCCGC
GACTGGACCGACAAGGAGGGCAACAAGCGCCGCTCCGCAGAGGTCGTGGCCGACAATGTGTACTTTGGGGATTCCAAGCG
CGACGCAGAGTCCGGCGGCTATCATGCCCCGGCTTACGGTGCGCCCGCCGGCGGCAATCGCGCCCCGGCTCCCGTGGATG
CCCACTCCGATTTCGCTGAGATCGGGGAAGAAGACGGTGAACTTCCGTTCTGA

Protein sequence :
MLNKIILMGRLTRDPELRRTGSGTAVTSFSLAVDRDFKSQSGEKETDFIDIVAWRATAEFVSKYFTKGRMAVVEGRLQLR
DWTDKEGNKRRSAEVVADNVYFGDSKRDAESGGYHAPAYGAPAGGNRAPAPVDAHSDFAEIGEEDGELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 6e-25 52
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-25 51
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-25 51
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 3e-23 50
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 3e-23 50
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-21 50
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 5e-23 50
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-22 50
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 1e-24 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 6e-25 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 6e-25 50