Gene Information

Name : GYO_0486 (GYO_0486)
Accession : YP_004875833.1
Strain : Bacillus subtilis TU-B-10
Genome accession: NC_016047
Putative virulence/resistance : Unknown
Product : alpha amylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.1
Position : 420483 - 422174 bp
Length : 1692 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACAGACTGGTGGAAGGATGCGGTGGTGTATCAAATTTATCCGAGAAGCTTTCAGGACAGCAATGGAGATGGAAT
GGGAGACCTGCGGGGGATCATTTCCCGCCTTGATTACATAAAGGAGCTCGGGGCAGATGTGATTTGGATTTGCCCGATTT
ATCCTTCTCCGAATGTTGATTACGGCTATGATGTGACGGACCATAAGATGATTATGGATTCATACGGAACGATGGATGAT
TTTCACGAGCTGCTTGACGAGGTGCATCAGCGCGGATTAAAGCTGGTGATGGATTTTGTGTTAAATCACACCTCGGTCGA
ACATCCGTGGTTTAAAGAAGCGGAGCTGGACAAAAACAGCAAATACCGCAGCTATTACTTTTGGCGCCCCGGCACAAAGA
ACGGCCCTCCGACGGACTGGGTGTCTGACTACGGATGCCCGGTCTGGCAATACGAGGAGCACACGGGAGAATATTATCTC
CACATGAATGCCGTCAAACAAGCTGATTTAAATTGGGAACATCCTGAGGTGCGCCAAGCAGTGTTTGACATGATGAGGTT
TTGGCTCGATAAAGGGGTAGACGGCTTGCGCATTGATCAGCTCCATCTCATTTCTAAGAAAGAATATCTTCCTTCGTATG
AGGACTATATCAATCAGCAGGCAGAGCCGAAGCCTTTCCAGCCAAATGGCGAACGAATTCATGACTATTTAAAAGAAATG
ACAGATGAAGTATTTTCCCGGTACGATGTGATGTCTGTCGGAGAGGTTGGCTCTGTTACACCGGAGGAAGGGCTAAAGTA
TACGGGAACCGATAAGCATGAGCTGAATATGATTTTTCACTTTCAGCATATGGAGCTTGACCAGCAGCCGGGAAAAGAAC
ATTGGGATGTAAAGCCCCTTGAGCTTTCTGATTTAAAATCGGTTTTGACATCATGGCAAAAGCAGCTGGAACATCAAGGG
TGGAATACATTGTATTGGTGTAACCACGACCAGCCCCGGATTGTGTCCAGGTTCGGAGACGATGGGGAATACCGCAAAGC
ATCTGCGAAAATGCTGGCCACCGTTCTTTATCTCATGAAGGGAACGCCATATATTTATCAGGGAGAAGAAATCGGGATGA
CAAACGCGCCGTTTACCCGGATTGAGGACTACAAAGATATCCAAACGATCAATATGTATCATAAACGGGTATTTGAAAAA
GGCTATGATCCAGAAGACGTGATGAGATCGATCTTAGCCAAAAGCCGGGATCATGCCCGGACGCCGATGCAGTGGAGCAA
CGGCAAAAATGCCGGATTTACTGACGGCACGCCTTGGTTGAAGGTCAACCCGAACTTCACGGCCATCAATGTGGAAGAGG
CACAGACAGACCCTGATTCGATCCTAACCTATTATAAAAAGCTGATCAGCCTGAGAAAGCAGTACGCTGATCTCATCAAA
GGAAGCTATGAACTTTTGCTTCCGGATGATCCGCAGCTGTTTGTGTACGTGAGAGAAAATGGTAAACAACAGCTTTTGTC
GGTGAATAACTTTTCAAAAGAGCAAGCTGTTTTCAGGTGGCCTAAGAACTGTGGCAAGGCTCAGGCATCCCTGCTTCTCA
GCAATTATAAAAACAACGGTGACCTTGCTGATGAAATGGTGTTTCAGCCTTATGAGAGCAGGGTGTATCTTCTGGACAAT
TCAATCAAATGA

Protein sequence :
MKTDWWKDAVVYQIYPRSFQDSNGDGMGDLRGIISRLDYIKELGADVIWICPIYPSPNVDYGYDVTDHKMIMDSYGTMDD
FHELLDEVHQRGLKLVMDFVLNHTSVEHPWFKEAELDKNSKYRSYYFWRPGTKNGPPTDWVSDYGCPVWQYEEHTGEYYL
HMNAVKQADLNWEHPEVRQAVFDMMRFWLDKGVDGLRIDQLHLISKKEYLPSYEDYINQQAEPKPFQPNGERIHDYLKEM
TDEVFSRYDVMSVGEVGSVTPEEGLKYTGTDKHELNMIFHFQHMELDQQPGKEHWDVKPLELSDLKSVLTSWQKQLEHQG
WNTLYWCNHDQPRIVSRFGDDGEYRKASAKMLATVLYLMKGTPYIYQGEEIGMTNAPFTRIEDYKDIQTINMYHKRVFEK
GYDPEDVMRSILAKSRDHARTPMQWSNGKNAGFTDGTPWLKVNPNFTAINVEEAQTDPDSILTYYKKLISLRKQYADLIK
GSYELLLPDDPQLFVYVRENGKQQLLSVNNFSKEQAVFRWPKNCGKAQASLLLSNYKNNGDLADEMVFQPYESRVYLLDN
SIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 7e-140 51