Gene Information

Name : GYO_3790 (GYO_3790)
Accession : YP_004878994.1
Strain : Bacillus subtilis TU-B-10
Genome accession: NC_016047
Putative virulence/resistance : Unknown
Product : alpha amylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.1
Position : 3504587 - 3506272 bp
Length : 1686 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAAATGGTGGAAAGAAGCTGTCGTTTATCAAATTTACCCGCGCAGTTTTTATGATTCCAATGGAGATGGATTCGG
GGATTTGCAAGGCGTGATTCAAAAGCTGGATTATATCAAAAATCTCGGGGCGGATGTGATCTGGCTCTCCCCGGTGTTTG
ATTCCCCGCAGGATGACAACGGCTATGACATCAGCGACTACAGAAACATGTACGAAAAATTTGGGACAAATGAAGATATG
TTTCAGTTAATTGATGAAGTGCACCAACGAGGTATGAAAATCATCATGGATTTGGTCGTGAACCACACGTCAGATGAGCA
TGCCTGGTTTGCTAAAAGCCGTAAGTCAAAGGACAATCCTTACCGTGATTATTATTTTTGGAAAGATCCGAAACCGGACG
GCTCAGAGCCGAATAATTGGGGATCGATCTTCTCAGGCCCGGCGTGGACGTTCGATGAAGGGACAGGGCAGTATTATTTG
CACTACTTTTCGAAAAAACAGCCTGATTTAAATTGGGAAAATGAAGCGGTACGCCGGGAAGTTTATGATTTGATGAGATT
TTGGATGGATAAAGGCGTTGACGGCTGGCGGATGGATGTGATCGGCTCCATTTCCAAGTACACCGATTTTCCGGACTACG
AAACAGATAGCAGCCGCAGCTATATCGTCGGACGTTATCATTCGAATGGCCCCCGCCTTCATGAATTTATTCAAGAGATG
AACAGGGAAGTGCTTTCTCATTACGACTGCATGACGGTAGGAGAGGCAAACGGCTCTGATATTGAAGAGGCGAAAAAGTA
CACAGATGCAAACAGGCAAGAGTTGAATATGATCTTTACATTTGAACATATGGATATTGATACAGAACAAAACTCGCCAA
ATGGGAAATGGCAGATCAAGCCGTTTGATGTGATTGCTTTAAAAAAGACGATGACAAGGTGGCAGACCGGGTTAATGAAT
GTCGGCTGGAATACCTTGTATTTTGAAAACCATGATCAGCCGAGGGTTATTTCCCGCTGGGGCAATGACGGCAAGCTGCG
AAAACAGTGTGCAAAAGCATTTGCAACGGTTCTCCACGGGATGAAAGGAACACCGTTTATTTACCAGGGAGAAGAAATTG
GCATGGTCAACAGTGATATGCCGCTGGAGATGTATGACGATCTTGAAATAAAAAATGCATATCGTGAACTAGTCATCGAA
AACAAAACGATGTCAGAAAAAGAGTTTCTAAAAGCCGTGACGAAAAAAGGACGGGATCATGCGAGAACACCAATGCAATG
GGATGCCGGAAAACATGCGGGATTCACAGCCGGAGACCCTTGGATAGCAGTAAATTCTCGCTATCAAGATATCAATGTGA
AAGAGTCCCTGGAAGATCAAGATTCGATTTTCTATTACTATCAGAAGCTTATTCAATTACGAAAGCAATATAAGGTCATG
GTATATGGAGATTATCAGCTGCTGCAGGAGAATGATCCGCAAATCTTTTCTTACCTCCGTGAATATCGAGGGGAAAAGCT
TCTCGTCGTTGTGAATTTGTCGGAAGACAAGGCTCTCTTCGAGGCGCCTGCGGAACTGATTCATGAGCGTTGGAAAGTGC
TGATTTCCAACTATTCGCAGGAGCCGGCTGACTTAAAGAGCATTTGTCTCGAACCTTATGAAGCTGTGATGGGCATTAGC
ATATGA

Protein sequence :
MSKWWKEAVVYQIYPRSFYDSNGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYRNMYEKFGTNEDM
FQLIDEVHQRGMKIIMDLVVNHTSDEHAWFAKSRKSKDNPYRDYYFWKDPKPDGSEPNNWGSIFSGPAWTFDEGTGQYYL
HYFSKKQPDLNWENEAVRREVYDLMRFWMDKGVDGWRMDVIGSISKYTDFPDYETDSSRSYIVGRYHSNGPRLHEFIQEM
NREVLSHYDCMTVGEANGSDIEEAKKYTDANRQELNMIFTFEHMDIDTEQNSPNGKWQIKPFDVIALKKTMTRWQTGLMN
VGWNTLYFENHDQPRVISRWGNDGKLRKQCAKAFATVLHGMKGTPFIYQGEEIGMVNSDMPLEMYDDLEIKNAYRELVIE
NKTMSEKEFLKAVTKKGRDHARTPMQWDAGKHAGFTAGDPWIAVNSRYQDINVKESLEDQDSIFYYYQKLIQLRKQYKVM
VYGDYQLLQENDPQIFSYLREYRGEKLLVVVNLSEDKALFEAPAELIHERWKVLISNYSQEPADLKSICLEPYEAVMGIS
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-141 55