Gene Information

Name : GYO_1698 (GYO_1698)
Accession : YP_004876974.1
Strain : Bacillus subtilis TU-B-10
Genome accession: NC_016047
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit clpE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1544372 - 1546348 bp
Length : 1977 bp
Strand : -
Note : -

DNA sequence :
ATGAGCATGGGTCCTCACTCTTTCGGTTTTCCGTTTGAACAAGCATTCCAGCCGAAAGAACATAGCGCAGCAAAACAAAG
CGAGAAAAAAGGATTGCTTGATGAGCTGGCTCAAAATATTACAAACGGTGCAAAAGCAGGTCTCATTGACCCCGTCATCG
GCCGTGATGAAGAAGTGGCGCGCGTGATCGAAATTCTGAACCGCCGCAACAAAAACAATCCAGTTCTCATTGGTGAGCCG
GGTGTTGGGAAAACCGCCATCGCCGAAGGACTTGCTTTAAAAATTGCTGAAGGTGATGTTCCAAACAAACTGAAAAACAA
AGAGCTTTACTTGCTTGATGTTGCATCCCTTGTTGCAAACACAGGAATCAGAGGCCAATTTGAAGAGAGAATGAAACAGC
TGATCACTGAGCTGAAAGAACGAAAAAATGTCATTCTGTTCATTGATGAAATTCATCTTCTCGTTGGCGCAGGCTCTGCT
GAAGGATCAATGGACGCTGGCAACATTCTTAAACCTGCACTTGCCAGAGGTGAACTGCAAGTCATCGGTGCGACAACACT
GAAAGAATACCGTCAAATCGAAAAAGATGCCGCGCTGGAAAGACGTTTTCAGCCTGTTATGGTGCAGGAGCCTTCAATTG
AACAGGCCATCCTCATTCTGCAAGGGATCAAAGACAAATACGAAGCATATCATGGCGTGACATTCAGTGATGAAGCAATC
AAAGCATGTGTGACTTTATCATCCCGCTACATTCAGGACAGACACCTGCCGGATAAAGCAATTGACTTATTAGATGAAGC
AGGTTCAAAAGCCAATCTGTTAATTGATGAGCTGAATGACGAAGATGCGGCTGAACGCTTAACTGCGATTGAAGCCGAAA
AAACAAAAGCCTTGGAAGAAGAAAATTACGAACTGGCGGCAAAACTCCGTGATGAAGAAATTGCATTAGAGAAAAAGCTG
AACAGCTCTTCTGCTCATTCCGCTGTCACTGTGAAAGCTGAGCACATTCAGGATATCATTGAACAAAAAACAGGCATCCC
TGTCGGCAAACTGCAGGCAGATGAACAAACAAAAATGAAAGAGCTTGAAGCAAAACTTCGTGAACGCGTGATCGGACAAG
AAGCCGCTGTTCAAAAAGTGGCAAAAGCGGTAAGACGAAGCCGCGCCGGATTAAAATCCAAAAACAGACCAGTAGGCTCC
TTCCTCTTTGTCGGCCCTACTGGCGTAGGGAAAACAGAACTTTCTAAAACGCTGGCAGATGAATTATTCGGCACAAAAGA
CGCTATGATCCGACTCGATATGAGCGAATACATGGAGAAACATGCCGTTTCTAAAATCATCGGTTCACCGCCTGGATATG
TCGGCCATGAGGAAGCTGGGCAATTAACAGAAAAAGTGCGCCGCAATCCATACAGCATCGTGTTGCTCGATGAGATTGAG
AAAGCACACCCTGACGTTCAGCATATGTTCCTGCAAATTATGGAGGACGGCCGTCTGACAGACAGCCAAGGCAGAACCGT
AAGCTTTAAAGACACTGTGATTATCATGACAAGCAACGCGGGTGCTGGTGAGAAACAAACGAAAGTCGGTTTCCAATCAG
ATGACAGTGTAATCGAAGAACAAACATTGATTGATTCACTGAGCATGTTCTTTAAACCTGAGTTCCTCAACCGTTTTGAC
AGCATTATTGAGTTCCGCTCACTGGAAAAAGAACATTTGGTCAAAATCGTCAGCCTGCTGCTTGGAGAACTTGAAGAAAC
ATTGTCAGAACGCGGCATCAGCTTGAGTGTGACAGACGAAGCGAAAGAAATAATCGCTGAGCTGGGCTACCACCCATCAT
TCGGCGCACGTCCGCTCAGAAGAACCATCCAAGAATGGATTGAGGATAAAATGACCGATCTGCTGCTTGACAATAGCGAG
ATCACAAGTTTTCACGTCATTGCAGAAGATCATACAATCAAAGTGCAAGCGAAATAA

Protein sequence :
MSMGPHSFGFPFEQAFQPKEHSAAKQSEKKGLLDELAQNITNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEP
GVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVANTGIRGQFEERMKQLITELKERKNVILFIDEIHLLVGAGSA
EGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALERRFQPVMVQEPSIEQAILILQGIKDKYEAYHGVTFSDEAI
KACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLLIDELNDEDAAERLTAIEAEKTKALEEENYELAAKLRDEEIALEKKL
NSSSAHSAVTVKAEHIQDIIEQKTGIPVGKLQADEQTKMKELEAKLRERVIGQEAAVQKVAKAVRRSRAGLKSKNRPVGS
FLFVGPTGVGKTELSKTLADELFGTKDAMIRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSIVLLDEIE
KAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNAGAGEKQTKVGFQSDDSVIEEQTLIDSLSMFFKPEFLNRFD
SIIEFRSLEKEHLVKIVSLLLGELEETLSERGISLSVTDEAKEIIAELGYHPSFGARPLRRTIQEWIEDKMTDLLLDNSE
ITSFHVIAEDHTIKVQAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-143 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYO_1698 YP_004876974.1 ATP-dependent Clp protease ATP-binding subunit clpE VFG0080 Protein 0.0 69
GYO_1698 YP_004876974.1 ATP-dependent Clp protease ATP-binding subunit clpE VFG0079 Protein 4e-151 54