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Name : clpC (GYO_0112) Accession : YP_004875491.1 Strain : Bacillus subtilis TU-B-10 Genome accession: NC_016047 Putative virulence/resistance : Virulence Product : genetic competence negative regulator ClpC/MecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 103651 - 106083 bp Length : 2433 bp Strand : + Note : - DNA sequence : ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTCCGTTTAGGTCATAA TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGGATTGCTGCTAAAGCTCTACAAGCGCTTG GGCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGGCATTCTTATGTCGGGACAGAACA TATTCTTCTTGGTCTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGAGTGCTGAATAACCTCGGTGTCAGCTTAAATAAAG CAAGACAGCAGGTGCTACAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGCCTTGATCCTGTAATCGGAAGAAGCAA GGAAATTCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTAGGTA AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCTGAAATCTTGCGCGATAAACGCGTGATG ACATTAGACATGGGAACAGTTGTTGCCGGCACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTCATGGATGA AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTTCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA TTGACGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGTGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATACAGGTTGATCAGCCGTCTGCAGATGAAAG TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCATCACCGAGTATCAATTACAGATGATGCCATTGAAGCTG CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAGGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCAGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA CTCCCGTGTCATTGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTTAGACGTGCAAGAGCAGGATTAAAAGATC CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA TCCATTTTCGGTGATGAGGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTCCTGCAAGTTCTTGAAGACGGACGATTGACT GATTCTAAGGGACGTACAGTCGATTTCCGTAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA AACGTGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTCACT GAAATCGTGTCATTGATGTCTGATCAATTAACAAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACTTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG AGGACCGTTTATCTGAAGAACTCCTCCGAGGAAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAA TTTGTCGTAAAAACGACTGCTAAAACGAATTAA Protein sequence : MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE FVVKTTAKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004875491.1 | genetic competence negative regulator ClpC/MecB | VFG0079 | Protein | 0.0 | 79 |
| clpC | YP_004875491.1 | genetic competence negative regulator ClpC/MecB | VFG0080 | Protein | 1e-152 | 52 |
