Gene Information

Name : TASI_0395 (TASI_0395)
Accession : YP_004874194.1
Strain : Taylorella asinigenitalis MCE3
Genome accession: NC_016043
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine 4,6-dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 399036 - 400685 bp
Length : 1650 bp
Strand : +
Note : -

DNA sequence :
TTGCATCGAGGAATATGGGTATTTGCAAGTCTAAATGATATTTATCGTACCATTCAAGTCGCTGCAATTTCTCTTATATC
TCTTCTAACAATAAAAGCGTTTATTTTCCACAATTCAGCCGAGATTCCACGTAGCATCTTTGTACTATATCCACTATTGC
TAGTTATTATTATGGGTGGAGCTCGTTTCGCTTGGCGAGCTATTAATGATAGACGTAAACATACCGTACACTCAAAAGCT
AAGCCCGTAATCATTGTTGGAGCTGGAGAGGCAGGTATCATGCTTATGCGAGAACTCGATCGCTCAAGCGTTTGGCGTGT
CGTGGCCTTGCTTGATGATGATGAACGCAAACTGGGACTAGAGTTGCTTGGCAGACGAGTCGTTGGAAGCACTAAGGATC
TTGCCCAATCTCTGAAAGAGTATGGGGCGAAACACGTAATCATTGCCATCCCATCGGCGGCTCATGAGGTTATGCAAAAT
GTCACGAATATCGCTTTAAATGCGGGTGCTGCTGTGTTTACGGTCCCAAATCTTGAGGATTTGATGAGTGGGCGCGTTGC
AATTAATGCGATGAGGCCCGTGAATATTGAGGACCTACTTGGCCGCGATGCTGTTGAGCTTGATACAGCGAATATTTCGG
AGCTTATTTCTAATAAGTGTGTGCTCGTGTCGGGTGCGGGTGGGTCCATTGGCAGCGAGCTATGCCGTCAGATTGCTAAG
TATAAGCCTCAAAAGCTAGTTCTAGTCGAGCTCTCGGAGTTTGCCCTTTACACGATTGAGCAGTGGTTTAGCGATAACTG
CTGCGAGACGCAGATTATTCCTTTGACAGCGGATGTAAAAAATTATGCACGCATGAAGGCCATTTTTGAGCAGCATCGCC
CAAGCCTTGTGTTCCATGCTGCAGCATATAAGCATGTGCCTCTTATGGAAGTTTCAAATGCTTTTGAAGCCATTCGCAAT
AACAGTTTCGGCACTTATAATTTAGCGAAGGTGTCGGTTGAGACGGGGGTTCGTCGGTTTGTGCTCATTTCCACCGATAA
GGCCGTCAATCCTACTAATGTGATGGGTGCTACGAAACGCCTTGCTGAAAAGCTACTTGAACGCATGCAGACATTTCATG
GCCAAACAACTACATTTAATATGGTCCGCTTTGGCAATGTTCTCGGGTCTACCGGTAGTGTTATTCCTAAGTTTCAAAAG
CAAATCCAAAAAGGTGGGCCTATAACCGTCACGCATCCGGATATTAATCGGTACTTTATGTCTATTCCAGAAGCTGCACA
ACTAGTAATACAGGCGGCGACTATGGGGCAGGGCGGTGAAGTATTTGTGCTTGATATGGGTAAGCCTGTGCGGATTGTTG
ATTTAGCAAAAAATATGATTCGGCTATCTGGATTTACTGAGGATCAAATTGCTATTGAGTACACGGGCTTAAGGCCAGGC
GAGAAACTTTACGAAGAGCTTATGGCAGATGAGGAAACTACATCAGCAACATCCCATGGGAAACTGCGCATTGCCAAAAC
AGTACCTACAGCAGAGGGATTGATTAAGCGGTTTGAGGAATGGATTTCTGAAAGTGATGCACGTACGGATGAGGAGGTGC
GCAAGCAATTAAAAGAGTGGATTCCTGAATATAATCCGTCTACGAATTAA

Protein sequence :
MHRGIWVFASLNDIYRTIQVAAISLISLLTIKAFIFHNSAEIPRSIFVLYPLLLVIIMGGARFAWRAINDRRKHTVHSKA
KPVIIVGAGEAGIMLMRELDRSSVWRVVALLDDDERKLGLELLGRRVVGSTKDLAQSLKEYGAKHVIIAIPSAAHEVMQN
VTNIALNAGAAVFTVPNLEDLMSGRVAINAMRPVNIEDLLGRDAVELDTANISELISNKCVLVSGAGGSIGSELCRQIAK
YKPQKLVLVELSEFALYTIEQWFSDNCCETQIIPLTADVKNYARMKAIFEQHRPSLVFHAAAYKHVPLMEVSNAFEAIRN
NSFGTYNLAKVSVETGVRRFVLISTDKAVNPTNVMGATKRLAEKLLERMQTFHGQTTTFNMVRFGNVLGSTGSVIPKFQK
QIQKGGPITVTHPDINRYFMSIPEAAQLVIQAATMGQGGEVFVLDMGKPVRIVDLAKNMIRLSGFTEDQIAIEYTGLRPG
EKLYEELMADEETTSATSHGKLRIAKTVPTAEGLIKRFEEWISESDARTDEEVRKQLKEWIPEYNPSTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-90 47
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 6e-94 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TASI_0395 YP_004874194.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG1300 Protein 4e-88 48
TASI_0395 YP_004874194.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG0029 Protein 1e-79 43