Gene Information

Name : wbpO (GNIT_0757)
Accession : YP_004870894.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Virulence
Product : VI polysaccharide biosynthesis protein VipA/tviB
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : 1.1.1.-
Position : 834061 - 835308 bp
Length : 1248 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATTAAATAGAAGTGCCACGAAAATAGGGGTTATCGGTCTTGGTTACGTTGGTTTACCTTTAGCGGTAGAGTTTGG
TAAACACTTTATTACGGTTGGATTCGATACTAATCAAAAACGTGTCCAAGAGCTTAACTTGGGCTATGACAATACGGAGG
AGCTTGAAACAGATGAAATACATTTGTCCGATAAACTATCCATAACCTCTGATATTAATAAGATTAAAGCATGTAATATT
TATATAGTTACCGTGCCAACGCCCGTCGATATAAATAAACAACCAGACTTAACTCCGCTTATAAACGTTAGTGAAATGAT
AGCCCCGCATATCGCTAATGGAAATATTATTATATATGAATCAACAGTTTACCCCGGCGTTACGGAAGACATATGCGTAC
CAATATTGGAAAAAATCAGTGGTTTAGTATTCAACAAAGACTTTTTTGCAGGCTATTCACCTGAACGCATTAATCCTGGG
GACAAAGTAAAACGACTCACCAACATAATAAAAGTTACCTCTGGCTCTACACCAGAAGTTGCCGAGCTAATAGATACCTT
GTATCAAACTATTGTGATTGCAGGTACACACAAAGCTCCTTCAATCAAAGTCGCTGAAGCGTCAAAAGTAATAGAAAACG
TGCAACGCGATGTCAATATCGCGCTAGTCAATGAGTTACATCAAGTGTTTAATAAACTAGGCATTAACACCAAGGATGTC
ATTGACGCAGCCGCAACCAAATGGAATTTTATGAAATTAATGCCGGGCATGGTTGGTGGCCATTGTATCAGTGTCGATCC
TTATTACTTGTTACATAAATCTGAAAATGCCGGATTTATCCCCGATTTAATGAGAACCGCCAGAGAAATAAACAATGGAA
TGCCAAACTATTTTGCCAATGACTTTTTACGCAAACTGATTTTGCGTAAGATCAATCCACTCAATTGTAAAATTTTACTA
TTGGGCTTTACGTTTAAAGAAAACTGTCCTGATATAAGAAACACAAAAGTATACGAGCTTTACATTGTGTTAATCAATAT
GGGATTAGATGTTCAGATATATGATCCGTGGGTTAATAAAGAAGAGGTTTTCCAAACTTTTAATGTAGAAGTCTTAACTG
AATTAAATCCAAACCAAGTGTTTGATGTTGGATTTTTAGCAGTGGCACATGACACTATTGTATCTGATTTAGCAACTCAA
AAATTAATGTTATCCAAAAATTTTGTTTATGACTTTAGAGGCTCTTAA

Protein sequence : 
MKLNRSATKIGVIGLGYVGLPLAVEFGKHFITVGFDTNQKRVQELNLGYDNTEELETDEIHLSDKLSITSDINKIKACNI
YIVTVPTPVDINKQPDLTPLINVSEMIAPHIANGNIIIYESTVYPGVTEDICVPILEKISGLVFNKDFFAGYSPERINPG
DKVKRLTNIIKVTSGSTPEVAELIDTLYQTIVIAGTHKAPSIKVAEASKVIENVQRDVNIALVNELHQVFNKLGINTKDV
IDAAATKWNFMKLMPGMVGGHCISVDPYYLLHKSENAGFIPDLMRTAREINNGMPNYFANDFLRKLILRKINPLNCKILL
LGFTFKENCPDIRNTKVYELYIVLINMGLDVQIYDPWVNKEEVFQTFNVEVLTELNPNQVFDVGFLAVAHDTIVSDLATQ
KLMLSKNFVYDFRGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-101 52
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-101 52
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-88 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpO YP_004870894.1 VI polysaccharide biosynthesis protein VipA/tviB VFG0431 Protein 4e-102 52