Gene Information

Name : GNIT_0584 (GNIT_0584)
Accession : YP_004870731.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 648439 - 649848 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCAATCGAGTCGACATTAGAACTAATTAAAGAGAGCGAAGCGAAATTTATTGATTTGCGCTTTACAGATACAAAGGG
TAAAGAGCAACACGTTACTATTCCTACTCACCAAGTAGATGAAGACTTCTTTGAAGAAGGTAAAATGTTCGATGGTTCTT
CAATTGCTGGCTGGAAAGGCATAAATGAATCCGACATGGTGCTTATGCCTGATCCAACAACTGCAGTATTGGACCCGTTT
GCTGAAGAAACACAGATAAATATTACCTGTGATATCTTGGAACCATCGACTATGCAGGGTTACGATCGTGATCCGCGCAC
TATTGCAAAGCGTGCTGAAGAGTTCCTAAAATCAACTGGCGTTGGCGATACTGTATTATTTGGTCCTGAGCCAGAATTCT
TCCTATTCGACGACGTTCGCTACCACACTGATATGTCAGGTTCTTTCTTCAAAATTGATGCTGAAGAAGCTGCATGGAAC
TCTGGTGCTGAGTTCGAAGGTGGCAACAAAGGCCATCGTCCGGGCGTTAAAGGCGGTTACTTTCCAGTTTCACCTGTCGA
TTCAGCGCACGATACTCGTGCCGCTATGTGCCTAGTAATGGAAGAAATGGGACTCGTTGTAGAGGCTCATCACCACGAAG
TTGCGACGGCCGGCCAAAACGAGATCGCTTGCAAATTCAACAGCATGGTTAAGAAAGCAGACGAAATTCAAATTTATAAG
TATGTTGTACACAACGTAGCTGATGCCTACGGACAAACTGCAACCTTTATGCCTAAGCCGCTTGTAGGCGATAACGGTTC
TGGCATGCATTGCCATATGTCAATTAGTAAAGATGGCAAGAACACCTTTGCTGGCGACAGCTACGCTGGTCTTTCTGAAA
CTGCTTTGTTCTACATTGGCGGTATTATTAAGCATGCTAAAGCAATCAATGCGTTCGCAAATGCGTCGACTAACTCTTAT
AAGCGTTTGGTGCCTCATTTCGAAGCGCCTGTTATGCTAGCTTATTCTGCGCGTAACCGTTCAGCTTCTATTCGTATTCC
TTACGTAACAAGTGAGAGAGCGCGCCGTATTGAAGTTCGTTTCCCTGACCCATCAGCTAACCCATACCTAGCATTTACTG
CGTTATTGATGGCTGGTCTTGACGGTATTAAAAATAAGATCCATCCAGGTGAGTCAATGGATAAGGACTTGTATGATTTA
CCTGCTGAAGAAGCAGCGTCTATCCCTCAAGTTGCTCGTTCATTAGAAGAAGCGTTAGCTGCATTGAATGTTGACCGTGA
TTTCTTAACAGCCGGTGGCGTTATGAGCGACGACATGATTGATGCGTATATAGAGCTAAAGACTGCTGAAGTACAAAGAA
TTAATATGTCAACGCATCCAGTTGAGTTTGAGTTGTACTATAGCGTTTAG

Protein sequence :
MSIESTLELIKESEAKFIDLRFTDTKGKEQHVTIPTHQVDEDFFEEGKMFDGSSIAGWKGINESDMVLMPDPTTAVLDPF
AEETQINITCDILEPSTMQGYDRDPRTIAKRAEEFLKSTGVGDTVLFGPEPEFFLFDDVRYHTDMSGSFFKIDAEEAAWN
SGAEFEGGNKGHRPGVKGGYFPVSPVDSAHDTRAAMCLVMEEMGLVVEAHHHEVATAGQNEIACKFNSMVKKADEIQIYK
YVVHNVADAYGQTATFMPKPLVGDNGSGMHCHMSISKDGKNTFAGDSYAGLSETALFYIGGIIKHAKAINAFANASTNSY
KRLVPHFEAPVMLAYSARNRSASIRIPYVTSERARRIEVRFPDPSANPYLAFTALLMAGLDGIKNKIHPGESMDKDLYDL
PAEEAASIPQVARSLEEALAALNVDRDFLTAGGVMSDDMIDAYIELKTAEVQRINMSTHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-103 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GNIT_0584 YP_004870731.1 glutamine synthetase VFG1399 Protein 2e-112 50