|
Name : gspF (GNIT_3469) Accession : YP_004873556.1 Strain : Glaciecola nitratireducens FR1064 Genome accession: NC_016041 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3894988 - 3896202 bp Length : 1215 bp Strand : + Note : - DNA sequence : ATGGCAGCCTTTGCATACAAGGCCATGGATGCCAATGGAAAATCCAAAAGTGGCGTACTTGAAGGCGATAACGCGCGGCA AATTCGCCAACAAATTCGTGAACAAGGTTTAATTCCGCTTGAACTTGAGCAAGTGGCTGAACAAGAGAAAAAAACACAAG CCTCGTTCTCGCTCTTTAAAGCCAAGATTTCTGCCGGTGAGCTTGCTCTCTTAACACGCCAGATGGCCACTCTAATTGAG TCAGCTCTACCTATTGAAGAAGCATTGCTTGCCGTTGCCGAACAATGCGAAAAACCACGCCATAAAAACATGATGATGGC GGTTCGCAGTAAGGTAGTCGAAGGCCATGGTTTTGCCGACGCTTTGTCTGAATTTCCCTATGTGTTCGACAACCTATTTC GTGCCATGGTAGCTGCTGGCGAAAAATCAGGTCATTTAGATACCGTGCTAAACCGACTCGCTGACTACACCGAAAACAGA GAACGCACACGTAATCAAATTATCCAAGCATTGGTATATCCGTTAATCATGATGGTAGTGGCGGTTGGTGTAGTCATTAT GCTTTTGGTGAAAGTCGTACCGACCATTGTTGGCCAATTTGATCAAATGGGCCAAGATTTACCCACCATTACAAATATAT TAATTGCAATTAGTGACGGTGTGCAAAATTACGGTGTGTATGCGGCTATCGCACTTGCAGTAATAATATTCTTAATAGCA CGATTATTAGCGATTCCTCGTATGCGCATGAAATACCACAAAAAATTACTGCGCATGCCCTTTGTTGGCCGATTAACAAG AAGCACAAACACCGCACGATTCGCTCGGACTTTGAGCATTTTAACCGCCAGCGCGGTACCTTTATTAGAGTCAATGCGCA TTGCAGGGAATGTTTTAGAGAACCTTCACCTTAAAGAAGCGGTCAAAGAAGCAGCGTCAAAAGTAAAAGAAGGGTCAAGC CTTCGAAATGCATTGGAAAAAACCAAAATGTTCCCACCAATGATGATGCATATGATTGCATCCGGTGAGCGCTCTGGTGA GTTACAACAGATGTTAGCGCGAGCTGCTGACAACCAAGACAGAGAATTTGAGTCAACAGTAAGCATTTCTCTGAAAATAT TTGAACCCGTGCTGATTGTCAGTATGGCGGGTGTTGTCCTATTTATAGTATTGGCAATATTAATGCCGATATTGGCATTA AACAGTTTAGTCTAG Protein sequence : MAAFAYKAMDANGKSKSGVLEGDNARQIRQQIREQGLIPLELEQVAEQEKKTQASFSLFKAKISAGELALLTRQMATLIE SALPIEEALLAVAEQCEKPRHKNMMMAVRSKVVEGHGFADALSEFPYVFDNLFRAMVAAGEKSGHLDTVLNRLADYTENR ERTRNQIIQALVYPLIMMVVAVGVVIMLLVKVVPTIVGQFDQMGQDLPTITNILIAISDGVQNYGVYAAIALAVIIFLIA RLLAIPRMRMKYHKKLLRMPFVGRLTRSTNTARFARTLSILTASAVPLLESMRIAGNVLENLHLKEAVKEAASKVKEGSS LRNALEKTKMFPPMMMHMIASGERSGELQQMLARAADNQDREFESTVSISLKIFEPVLIVSMAGVVLFIVLAILMPILAL NSLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-83 | 52 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-84 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_004873556.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-79 | 51 |
| gspF | YP_004873556.1 | general secretion pathway protein F | VFG0181 | Protein | 6e-81 | 51 |
| gspF | YP_004873556.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-72 | 42 |
